(6 nodes) Dynactin complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6ZTS6_CIOIN	Uncharacterized protein; Belongs to the actin family. (429 aa)
	LOC100180096	Dynactin subunit 4 isoform X2. (470 aa)
	LOC100180245	Dynactin subunit 6-like. (182 aa)
	F7B690_CIOIN	CAP-Gly domain-containing protein. (1092 aa)
	LOC100177191	Uncharacterized protein LOC100177191. (181 aa)
	F7APT3_CIOIN	Uncharacterized protein. (184 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6ZTS6_CIOIN	F7APT3_CIOIN	ENSCINP00000002709	ENSCINP00000022146	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.990
F6ZTS6_CIOIN	F7B690_CIOIN	ENSCINP00000002709	ENSCINP00000010951	Uncharacterized protein; Belongs to the actin family.	CAP-Gly domain-containing protein.	0.969
F6ZTS6_CIOIN	LOC100177191	ENSCINP00000002709	ENSCINP00000018747	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein LOC100177191.	0.972
F6ZTS6_CIOIN	LOC100180096	ENSCINP00000002709	ENSCINP00000004863	Uncharacterized protein; Belongs to the actin family.	Dynactin subunit 4 isoform X2.	0.995
F6ZTS6_CIOIN	LOC100180245	ENSCINP00000002709	ENSCINP00000005799	Uncharacterized protein; Belongs to the actin family.	Dynactin subunit 6-like.	0.995
F7APT3_CIOIN	F6ZTS6_CIOIN	ENSCINP00000022146	ENSCINP00000002709	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.990
F7APT3_CIOIN	F7B690_CIOIN	ENSCINP00000022146	ENSCINP00000010951	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.959
F7APT3_CIOIN	LOC100177191	ENSCINP00000022146	ENSCINP00000018747	Uncharacterized protein.	Uncharacterized protein LOC100177191.	0.967
F7APT3_CIOIN	LOC100180096	ENSCINP00000022146	ENSCINP00000004863	Uncharacterized protein.	Dynactin subunit 4 isoform X2.	0.998
F7APT3_CIOIN	LOC100180245	ENSCINP00000022146	ENSCINP00000005799	Uncharacterized protein.	Dynactin subunit 6-like.	0.998
F7B690_CIOIN	F6ZTS6_CIOIN	ENSCINP00000010951	ENSCINP00000002709	CAP-Gly domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.969
F7B690_CIOIN	F7APT3_CIOIN	ENSCINP00000010951	ENSCINP00000022146	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.959
F7B690_CIOIN	LOC100177191	ENSCINP00000010951	ENSCINP00000018747	CAP-Gly domain-containing protein.	Uncharacterized protein LOC100177191.	0.977
F7B690_CIOIN	LOC100180096	ENSCINP00000010951	ENSCINP00000004863	CAP-Gly domain-containing protein.	Dynactin subunit 4 isoform X2.	0.970
F7B690_CIOIN	LOC100180245	ENSCINP00000010951	ENSCINP00000005799	CAP-Gly domain-containing protein.	Dynactin subunit 6-like.	0.957
LOC100177191	F6ZTS6_CIOIN	ENSCINP00000018747	ENSCINP00000002709	Uncharacterized protein LOC100177191.	Uncharacterized protein; Belongs to the actin family.	0.972
LOC100177191	F7APT3_CIOIN	ENSCINP00000018747	ENSCINP00000022146	Uncharacterized protein LOC100177191.	Uncharacterized protein.	0.967
LOC100177191	F7B690_CIOIN	ENSCINP00000018747	ENSCINP00000010951	Uncharacterized protein LOC100177191.	CAP-Gly domain-containing protein.	0.977
LOC100177191	LOC100180096	ENSCINP00000018747	ENSCINP00000004863	Uncharacterized protein LOC100177191.	Dynactin subunit 4 isoform X2.	0.977
LOC100177191	LOC100180245	ENSCINP00000018747	ENSCINP00000005799	Uncharacterized protein LOC100177191.	Dynactin subunit 6-like.	0.983