(10 nodes) Cytoplasmic dynein complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100185043	Uncharacterized protein. (495 aa)
	F7AAA1_CIOIN	Uncharacterized protein. (361 aa)
	F7BML6_CIOIN	WD_REPEATS_REGION domain-containing protein. (528 aa)
	LOC100185458	Uncharacterized protein LOC100185458. (315 aa)
	LOC100180883	Tctex1 domain-containing protein 2-like. (127 aa)
	LOC100187521	Uncharacterized protein. (348 aa)
	F6UI30_CIOIN	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (184 aa)
	dynlt1	Tctex1-related dynein light chain. (113 aa)
	Rbdlc	Dynein light chain roadblock. (96 aa)
	dynll6	Dynein light chain. (89 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6UI30_CIOIN	F7AAA1_CIOIN	ENSCINP00000022842	ENSCINP00000004235	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.725
F6UI30_CIOIN	F7BML6_CIOIN	ENSCINP00000022842	ENSCINP00000008987	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	WD_REPEATS_REGION domain-containing protein.	0.994
F6UI30_CIOIN	LOC100180883	ENSCINP00000022842	ENSCINP00000016129	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Tctex1 domain-containing protein 2-like.	0.523
F6UI30_CIOIN	LOC100185043	ENSCINP00000022842	ENSCINP00000000501	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.725
F6UI30_CIOIN	LOC100185458	ENSCINP00000022842	ENSCINP00000012560	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein LOC100185458.	0.783
F6UI30_CIOIN	LOC100187521	ENSCINP00000022842	ENSCINP00000022791	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.712
F6UI30_CIOIN	Rbdlc	ENSCINP00000022842	ENSCINP00000031790	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Dynein light chain roadblock.	0.826
F6UI30_CIOIN	dynll6	ENSCINP00000022842	ENSCINP00000035007	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Dynein light chain.	0.872
F6UI30_CIOIN	dynlt1	ENSCINP00000022842	ENSCINP00000031358	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Tctex1-related dynein light chain.	0.865
F7AAA1_CIOIN	F6UI30_CIOIN	ENSCINP00000004235	ENSCINP00000022842	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.725
F7AAA1_CIOIN	F7BML6_CIOIN	ENSCINP00000004235	ENSCINP00000008987	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.540
F7AAA1_CIOIN	LOC100180883	ENSCINP00000004235	ENSCINP00000016129	Uncharacterized protein.	Tctex1 domain-containing protein 2-like.	0.838
F7AAA1_CIOIN	LOC100185043	ENSCINP00000004235	ENSCINP00000000501	Uncharacterized protein.	Uncharacterized protein.	0.953
F7AAA1_CIOIN	LOC100185458	ENSCINP00000004235	ENSCINP00000012560	Uncharacterized protein.	Uncharacterized protein LOC100185458.	0.835
F7AAA1_CIOIN	LOC100187521	ENSCINP00000004235	ENSCINP00000022791	Uncharacterized protein.	Uncharacterized protein.	0.958
F7AAA1_CIOIN	Rbdlc	ENSCINP00000004235	ENSCINP00000031790	Uncharacterized protein.	Dynein light chain roadblock.	0.863
F7AAA1_CIOIN	dynll6	ENSCINP00000004235	ENSCINP00000035007	Uncharacterized protein.	Dynein light chain.	0.855
F7AAA1_CIOIN	dynlt1	ENSCINP00000004235	ENSCINP00000031358	Uncharacterized protein.	Tctex1-related dynein light chain.	0.787
F7BML6_CIOIN	F6UI30_CIOIN	ENSCINP00000008987	ENSCINP00000022842	WD_REPEATS_REGION domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.994
F7BML6_CIOIN	F7AAA1_CIOIN	ENSCINP00000008987	ENSCINP00000004235	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.540