(28 nodes) Axonemal microtubule, and Cilia- and flagella-associated protein 68/107 network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6YUP1_CIOIN	Uncharacterized protein. (166 aa)
	pf-rib	Protofilament ribbon protein. (379 aa)
	LOC100186452	Tektin-1-like. (402 aa)
	LOC100176448	Protein C9orf135-like. (224 aa)
	F7AB73_CIOIN	Uncharacterized protein. (1887 aa)
	LOC100180876	Uncharacterized protein C1orf158 homolog. (227 aa)
	F6Y3N8_CIOIN	EF-hand domain-containing protein. (283 aa)
	LOC100177721	WD_REPEATS_REGION domain-containing protein. (620 aa)
	tektinA1	Uncharacterized protein. (447 aa)
	efhc2	EFHC2 protein. (741 aa)
	F6TDK2_CIOIN	Uncharacterized protein. (567 aa)
	F7A7P7_CIOIN	Enkurin domain-containing protein. (258 aa)
	F6XBA5_CIOIN	Uncharacterized protein. (497 aa)
	LOC100180562	UPF0686 protein C11orf1 homolog. (156 aa)
	F7A2F3_CIOIN	Uncharacterized protein. (157 aa)
	LOC100177416	Sperm-associated antigen 8-like. (201 aa)
	LOC100185443	Protein Flattop-like. (217 aa)
	LOC100181281	Uncharacterized protein. (520 aa)
	F6RLP1_CIOIN	Uncharacterized protein. (546 aa)
	F6TT48_CIOIN	Uncharacterized protein. (194 aa)
	LOC100185469	Uncharacterized protein. (139 aa)
	F7AR88_CIOIN	Uncharacterized protein. (229 aa)
	F6SY22_CIOIN	Uncharacterized protein. (307 aa)
	F6SIS7_CIOIN	Uncharacterized protein. (282 aa)
	H2XMC6_CIOIN	Uncharacterized protein. (496 aa)
	H2XT39_CIOIN	Uncharacterized protein. (494 aa)
	LOC100177695	Uncharacterized protein. (236 aa)
	LOC100176209	Uncharacterized protein. (311 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RLP1_CIOIN	F6SY22_CIOIN	ENSCINP00000023931	ENSCINP00000026324	Uncharacterized protein.	Uncharacterized protein.	0.537
F6RLP1_CIOIN	F6TDK2_CIOIN	ENSCINP00000023931	ENSCINP00000013665	Uncharacterized protein.	Uncharacterized protein.	0.609
F6RLP1_CIOIN	F6TT48_CIOIN	ENSCINP00000023931	ENSCINP00000024091	Uncharacterized protein.	Uncharacterized protein.	0.494
F6RLP1_CIOIN	F6XBA5_CIOIN	ENSCINP00000023931	ENSCINP00000013874	Uncharacterized protein.	Uncharacterized protein.	0.656
F6RLP1_CIOIN	F6Y3N8_CIOIN	ENSCINP00000023931	ENSCINP00000011460	Uncharacterized protein.	EF-hand domain-containing protein.	0.487
F6RLP1_CIOIN	F6YUP1_CIOIN	ENSCINP00000023931	ENSCINP00000002164	Uncharacterized protein.	Uncharacterized protein.	0.628
F6RLP1_CIOIN	F7A2F3_CIOIN	ENSCINP00000023931	ENSCINP00000015826	Uncharacterized protein.	Uncharacterized protein.	0.486
F6RLP1_CIOIN	F7A7P7_CIOIN	ENSCINP00000023931	ENSCINP00000013781	Uncharacterized protein.	Enkurin domain-containing protein.	0.615
F6RLP1_CIOIN	F7AB73_CIOIN	ENSCINP00000023931	ENSCINP00000009090	Uncharacterized protein.	Uncharacterized protein.	0.746
F6RLP1_CIOIN	F7AR88_CIOIN	ENSCINP00000023931	ENSCINP00000025727	Uncharacterized protein.	Uncharacterized protein.	0.487
F6RLP1_CIOIN	H2XMC6_CIOIN	ENSCINP00000023931	ENSCINP00000030809	Uncharacterized protein.	Uncharacterized protein.	0.589
F6RLP1_CIOIN	H2XT39_CIOIN	ENSCINP00000023931	ENSCINP00000032823	Uncharacterized protein.	Uncharacterized protein.	0.615
F6RLP1_CIOIN	LOC100176209	ENSCINP00000023931	ENSCINP00000034754	Uncharacterized protein.	Uncharacterized protein.	0.410
F6RLP1_CIOIN	LOC100176448	ENSCINP00000023931	ENSCINP00000008113	Uncharacterized protein.	Protein C9orf135-like.	0.589
F6RLP1_CIOIN	LOC100177416	ENSCINP00000023931	ENSCINP00000016212	Uncharacterized protein.	Sperm-associated antigen 8-like.	0.589
F6RLP1_CIOIN	LOC100177695	ENSCINP00000023931	ENSCINP00000034397	Uncharacterized protein.	Uncharacterized protein.	0.565
F6RLP1_CIOIN	LOC100177721	ENSCINP00000023931	ENSCINP00000011659	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.755
F6RLP1_CIOIN	LOC100180562	ENSCINP00000023931	ENSCINP00000015399	Uncharacterized protein.	UPF0686 protein C11orf1 homolog.	0.467
F6RLP1_CIOIN	LOC100180876	ENSCINP00000023931	ENSCINP00000010738	Uncharacterized protein.	Uncharacterized protein C1orf158 homolog.	0.456
F6RLP1_CIOIN	LOC100181281	ENSCINP00000023931	ENSCINP00000018768	Uncharacterized protein.	Uncharacterized protein.	0.623