(41 nodes) SNARE complex, and Dsl1/NZR complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6SFZ3_CIOIN	Nbas_N domain-containing protein. (337 aa)
	F6ZFI0_CIOIN	Uncharacterized protein. (665 aa)
	LOC100179496	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (622 aa)
	LOC100181871	t-SNARE coiled-coil homology domain-containing protein. (310 aa)
	LOC100181148	Syntaxin-17-like. (363 aa)
	LOC100186257	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (686 aa)
	ENSCINP00000009254	Uncharacterized protein. (173 aa)
	LOC100179814	Syntaxin-18. (291 aa)
	LOC100176507	Synaptobrevin homolog YKT6-like isoform X2; Belongs to the synaptobrevin family. (200 aa)
	F6SNI9_CIOIN	Uncharacterized protein. (252 aa)
	F6Y321_CIOIN	t-SNARE coiled-coil homology domain-containing protein. (236 aa)
	F7AT36_CIOIN	Uncharacterized protein. (302 aa)
	LOC100182843	Uncharacterized protein. (104 aa)
	F7A7X6_CIOIN	V-SNARE coiled-coil homology domain-containing protein. (118 aa)
	F6WAD4_CIOIN	AAA domain-containing protein; Belongs to the AAA ATPase family. (461 aa)
	F6WAC8_CIOIN	CDC48_N domain-containing protein. (222 aa)
	LOC100184004	Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (225 aa)
	F7AP11_CIOIN	Uncharacterized protein. (259 aa)
	LOC100183428	Uncharacterized protein. (786 aa)
	LOC100185029	Uncharacterized protein. (245 aa)
	LOC100184992	Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (214 aa)
	F6Y3U3_CIOIN	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (264 aa)
	F6Y3T4_CIOIN	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (274 aa)
	F6WA29_CIOIN	Uso1_p115_C domain-containing protein. (118 aa)
	F6W9R3_CIOIN	Uncharacterized protein. (181 aa)
	F6VLD0_CIOIN	Uncharacterized protein; Belongs to the synaptobrevin family. (221 aa)
	LOC100187429	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (160 aa)
	F6Z6E4_CIOIN	V-SNARE domain-containing protein. (176 aa)
	H2XNY0_CIOIN	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (312 aa)
	H2XQ02_CIOIN	Uncharacterized protein. (288 aa)
	H2XQ34_CIOIN	Uncharacterized protein. (295 aa)
	H2XQZ1_CIOIN	Uncharacterized protein. (135 aa)
	LOC100177611	Vesicle-associated membrane protein 4-like. (126 aa)
	H2XU17_CIOIN	Longin domain-containing protein. (62 aa)
	H2XUP2_CIOIN	V-SNARE coiled-coil homology domain-containing protein. (84 aa)
	H2XUZ6_CIOIN	Uncharacterized protein. (139 aa)
	H2XWH4_CIOIN	LLGL domain-containing protein. (101 aa)
	LOC100186647	BET1-like protein isoform X2. (111 aa)
	H2XYV9_CIOIN	Uncharacterized protein. (444 aa)
	H2Y0C8_CIOIN	Syntaxin-6_N domain-containing protein. (155 aa)
	LOC100181776	BET1 homolog. (102 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCINP00000009254	F6SFZ3_CIOIN	ENSCINP00000009254	ENSCINP00000000468	Uncharacterized protein.	Nbas_N domain-containing protein.	0.895
ENSCINP00000009254	F6WAC8_CIOIN	ENSCINP00000009254	ENSCINP00000014224	Uncharacterized protein.	CDC48_N domain-containing protein.	0.508
ENSCINP00000009254	F6WAD4_CIOIN	ENSCINP00000009254	ENSCINP00000014222	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.508
ENSCINP00000009254	F6ZFI0_CIOIN	ENSCINP00000009254	ENSCINP00000000583	Uncharacterized protein.	Uncharacterized protein.	0.951
ENSCINP00000009254	F7AP11_CIOIN	ENSCINP00000009254	ENSCINP00000015282	Uncharacterized protein.	Uncharacterized protein.	0.923
ENSCINP00000009254	H2XQ02_CIOIN	ENSCINP00000009254	ENSCINP00000031736	Uncharacterized protein.	Uncharacterized protein.	0.895
ENSCINP00000009254	H2XQ34_CIOIN	ENSCINP00000009254	ENSCINP00000031768	Uncharacterized protein.	Uncharacterized protein.	0.590
ENSCINP00000009254	H2XU17_CIOIN	ENSCINP00000009254	ENSCINP00000033151	Uncharacterized protein.	Longin domain-containing protein.	0.843
ENSCINP00000009254	H2XYV9_CIOIN	ENSCINP00000009254	ENSCINP00000034843	Uncharacterized protein.	Uncharacterized protein.	0.952
ENSCINP00000009254	LOC100179496	ENSCINP00000009254	ENSCINP00000003995	Uncharacterized protein.	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.510
ENSCINP00000009254	LOC100179814	ENSCINP00000009254	ENSCINP00000009317	Uncharacterized protein.	Syntaxin-18.	0.923
ENSCINP00000009254	LOC100183428	ENSCINP00000009254	ENSCINP00000018123	Uncharacterized protein.	Uncharacterized protein.	0.936
ENSCINP00000009254	LOC100185029	ENSCINP00000009254	ENSCINP00000018445	Uncharacterized protein.	Uncharacterized protein.	0.926
ENSCINP00000009254	LOC100186257	ENSCINP00000009254	ENSCINP00000008602	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.633
F6SFZ3_CIOIN	ENSCINP00000009254	ENSCINP00000000468	ENSCINP00000009254	Nbas_N domain-containing protein.	Uncharacterized protein.	0.895
F6SFZ3_CIOIN	F6WAC8_CIOIN	ENSCINP00000000468	ENSCINP00000014224	Nbas_N domain-containing protein.	CDC48_N domain-containing protein.	0.411
F6SFZ3_CIOIN	F6WAD4_CIOIN	ENSCINP00000000468	ENSCINP00000014222	Nbas_N domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.411
F6SFZ3_CIOIN	F6ZFI0_CIOIN	ENSCINP00000000468	ENSCINP00000000583	Nbas_N domain-containing protein.	Uncharacterized protein.	0.939
F6SFZ3_CIOIN	F7AP11_CIOIN	ENSCINP00000000468	ENSCINP00000015282	Nbas_N domain-containing protein.	Uncharacterized protein.	0.902
F6SFZ3_CIOIN	F7AT36_CIOIN	ENSCINP00000000468	ENSCINP00000011643	Nbas_N domain-containing protein.	Uncharacterized protein.	0.697