STRINGSTRING
LOC100180632 LOC100180632 F6UP49_CIOIN F6UP49_CIOIN F7AMF6_CIOIN F7AMF6_CIOIN LOC100176145 LOC100176145 F6XG01_CIOIN F6XG01_CIOIN F6WRU8_CIOIN F6WRU8_CIOIN F6VF77_CIOIN F6VF77_CIOIN F6T2R5_CIOIN F6T2R5_CIOIN F6T2N7_CIOIN F6T2N7_CIOIN F6U9S8_CIOIN F6U9S8_CIOIN F6YGR5_CIOIN F6YGR5_CIOIN LOC100179839 LOC100179839 LOC100176748 LOC100176748 F6PMK8_CIOIN F6PMK8_CIOIN F7A6N9_CIOIN F7A6N9_CIOIN LOC100182553 LOC100182553 LOC100179571 LOC100179571 F6UTD4_CIOIN F6UTD4_CIOIN F6U6A2_CIOIN F6U6A2_CIOIN F6RGX1_CIOIN F6RGX1_CIOIN LOC100182001 LOC100182001 F6UP73_CIOIN F6UP73_CIOIN LOC100175300 LOC100175300 LOC100181786 LOC100181786 LOC104265915 LOC104265915 F6UJ17_CIOIN F6UJ17_CIOIN LOC100184638 LOC100184638 LOC113474197 LOC113474197 LOC100176522 LOC100176522 F6T0L9_CIOIN F6T0L9_CIOIN LOC100181883 LOC100181883 F6PHJ3_CIOIN F6PHJ3_CIOIN F7BA39_CIOIN F7BA39_CIOIN F7ABF6_CIOIN F7ABF6_CIOIN LOC100186163 LOC100186163 F6XJ73_CIOIN F6XJ73_CIOIN F6ZL50_CIOIN F6ZL50_CIOIN F6Z0L2_CIOIN F6Z0L2_CIOIN LOC100179535 LOC100179535 F6TEJ9_CIOIN F6TEJ9_CIOIN F6V4B3_CIOIN F6V4B3_CIOIN LOC100183862 LOC100183862 F6RPM3_CIOIN F6RPM3_CIOIN F6QV69_CIOIN F6QV69_CIOIN F7BGY7_CIOIN F7BGY7_CIOIN F6UVA5_CIOIN F6UVA5_CIOIN F6UV64_CIOIN F6UV64_CIOIN H2XJS9_CIOIN H2XJS9_CIOIN H2XLC2_CIOIN H2XLC2_CIOIN LOC100187027 LOC100187027 H2XM49_CIOIN H2XM49_CIOIN LOC100180975 LOC100180975 H2XQC1_CIOIN H2XQC1_CIOIN H2XRE1_CIOIN H2XRE1_CIOIN LOC100178401 LOC100178401 H2XUB7_CIOIN H2XUB7_CIOIN H2XYG6_CIOIN H2XYG6_CIOIN LOC100179714 LOC100179714 H2XZK4_CIOIN H2XZK4_CIOIN H2Y2H0_CIOIN H2Y2H0_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100180632Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (804 aa)
F6UP49_CIOINUncharacterized protein. (1050 aa)
F7AMF6_CIOINClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1635 aa)
LOC100176145Sorting nexin-12-like isoform X1. (165 aa)
F6XG01_CIOINProtein kinase domain-containing protein. (402 aa)
F6WRU8_CIOINUncharacterized protein. (163 aa)
F6VF77_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (870 aa)
F6T2R5_CIOINAP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (914 aa)
F6T2N7_CIOINAdaptin_N domain-containing protein. (243 aa)
F6U9S8_CIOINNon-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (785 aa)
F6YGR5_CIOINSorting nexin; Involved in several stages of intracellular trafficking. (410 aa)
LOC100179839Sorting nexin-4-like. (441 aa)
LOC100176748Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (183 aa)
F6PMK8_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)
F7A6N9_CIOINUncharacterized protein. (480 aa)
LOC100182553AP-2 complex subunit mu isoform X3; Belongs to the adaptor complexes medium subunit family. (434 aa)
LOC100179571AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
F6UTD4_CIOINVps5 domain-containing protein. (96 aa)
F6U6A2_CIOINPX domain-containing protein. (255 aa)
F6RGX1_CIOINUBIQUITIN_CONJUGAT_2 domain-containing protein. (181 aa)
LOC100182001Phosphatidylinositol-binding clathrin assembly protein LAP-like. (615 aa)
F6UP73_CIOINENTH domain-containing protein. (222 aa)
LOC100175300AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (422 aa)
LOC100181786Sorting nexin-5. (367 aa)
LOC104265915Adaptin_N domain-containing protein. (312 aa)
F6UJ17_CIOINUncharacterized protein. (909 aa)
LOC100184638Sorting nexin-33-like. (566 aa)
LOC113474197Prostate-associated microseminoprotein-like. (152 aa)
LOC100176522AP-1 complex subunit gamma. (888 aa)
F6T0L9_CIOINRab-GAP TBC domain-containing protein. (398 aa)
LOC100181883AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1057 aa)
F6PHJ3_CIOINUncharacterized protein; Belongs to the adaptor complexes medium subunit family. (564 aa)
F7BA39_CIOINUncharacterized protein. (787 aa)
F7ABF6_CIOINAP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (954 aa)
LOC100186163Uncharacterized protein LOC100186163 isoform X3. (310 aa)
F6XJ73_CIOINUncharacterized protein. (143 aa)
F6ZL50_CIOINSortilin_C domain-containing protein. (278 aa)
F6Z0L2_CIOINClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (235 aa)
LOC100179535Vacuolar protein sorting-associated protein 26B. (315 aa)
F6TEJ9_CIOINBAR_3_WASP_bdg domain-containing protein. (207 aa)
F6V4B3_CIOINUncharacterized protein. (835 aa)
LOC100183862Uncharacterized protein. (360 aa)
F6RPM3_CIOINClathrin_bdg domain-containing protein. (357 aa)
F6QV69_CIOINTSNAXIP1_N domain-containing protein. (350 aa)
F7BGY7_CIOINUncharacterized protein. (467 aa)
F6UVA5_CIOINUncharacterized protein. (245 aa)
F6UV64_CIOINUncharacterized protein. (500 aa)
H2XJS9_CIOINProtein kinase domain-containing protein. (154 aa)
H2XLC2_CIOINAP complex subunit beta. (772 aa)
LOC100187027AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
H2XM49_CIOINPX domain-containing protein. (112 aa)
LOC100180975AP-3 complex subunit sigma-2 isoform X1. (189 aa)
H2XQC1_CIOINPX domain-containing protein. (496 aa)
H2XRE1_CIOINDUF1681 domain-containing protein. (215 aa)
LOC100178401Uncharacterized protein. (250 aa)
H2XUB7_CIOINSortilin-Vps10 domain-containing protein. (205 aa)
H2XYG6_CIOINSortilin-Vps10 domain-containing protein. (239 aa)
LOC100179714AP-3 complex subunit mu-1-like; Belongs to the adaptor complexes medium subunit family. (416 aa)
H2XZK4_CIOINB2-adapt-app_C domain-containing protein. (146 aa)
H2Y2H0_CIOINProtein kinase domain-containing protein. (203 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.