(6 nodes) Ragulator complex, and Gtr1/RagA G protein network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6UJF1_CIOIN	UDENN FLCN/SMCR8-type domain-containing protein. (561 aa)
	LOC100180665	Ras-related GTP-binding protein C. (371 aa)
	LOC100186482	Sodium-coupled neutral amino acid transporter 9-like. (460 aa)
	F6TGX2_CIOIN	Uncharacterized protein. (315 aa)
	LOC100177011	Ragulator complex protein LAMTOR2-B. (127 aa)
	LOC100181499	Uncharacterized protein LOC100181499. (166 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6TGX2_CIOIN	F6UJF1_CIOIN	ENSCINP00000016134	ENSCINP00000003434	Uncharacterized protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.994
F6TGX2_CIOIN	LOC100177011	ENSCINP00000016134	ENSCINP00000023727	Uncharacterized protein.	Ragulator complex protein LAMTOR2-B.	0.995
F6TGX2_CIOIN	LOC100180665	ENSCINP00000016134	ENSCINP00000010644	Uncharacterized protein.	Ras-related GTP-binding protein C.	0.999
F6TGX2_CIOIN	LOC100181499	ENSCINP00000016134	ENSCINP00000035422	Uncharacterized protein.	Uncharacterized protein LOC100181499.	0.993
F6TGX2_CIOIN	LOC100186482	ENSCINP00000016134	ENSCINP00000013975	Uncharacterized protein.	Sodium-coupled neutral amino acid transporter 9-like.	0.929
F6UJF1_CIOIN	F6TGX2_CIOIN	ENSCINP00000003434	ENSCINP00000016134	UDENN FLCN/SMCR8-type domain-containing protein.	Uncharacterized protein.	0.994
F6UJF1_CIOIN	LOC100177011	ENSCINP00000003434	ENSCINP00000023727	UDENN FLCN/SMCR8-type domain-containing protein.	Ragulator complex protein LAMTOR2-B.	0.840
F6UJF1_CIOIN	LOC100180665	ENSCINP00000003434	ENSCINP00000010644	UDENN FLCN/SMCR8-type domain-containing protein.	Ras-related GTP-binding protein C.	0.993
F6UJF1_CIOIN	LOC100181499	ENSCINP00000003434	ENSCINP00000035422	UDENN FLCN/SMCR8-type domain-containing protein.	Uncharacterized protein LOC100181499.	0.766
F6UJF1_CIOIN	LOC100186482	ENSCINP00000003434	ENSCINP00000013975	UDENN FLCN/SMCR8-type domain-containing protein.	Sodium-coupled neutral amino acid transporter 9-like.	0.706
LOC100177011	F6TGX2_CIOIN	ENSCINP00000023727	ENSCINP00000016134	Ragulator complex protein LAMTOR2-B.	Uncharacterized protein.	0.995
LOC100177011	F6UJF1_CIOIN	ENSCINP00000023727	ENSCINP00000003434	Ragulator complex protein LAMTOR2-B.	UDENN FLCN/SMCR8-type domain-containing protein.	0.840
LOC100177011	LOC100180665	ENSCINP00000023727	ENSCINP00000010644	Ragulator complex protein LAMTOR2-B.	Ras-related GTP-binding protein C.	0.994
LOC100177011	LOC100181499	ENSCINP00000023727	ENSCINP00000035422	Ragulator complex protein LAMTOR2-B.	Uncharacterized protein LOC100181499.	0.999
LOC100177011	LOC100186482	ENSCINP00000023727	ENSCINP00000013975	Ragulator complex protein LAMTOR2-B.	Sodium-coupled neutral amino acid transporter 9-like.	0.998
LOC100180665	F6TGX2_CIOIN	ENSCINP00000010644	ENSCINP00000016134	Ras-related GTP-binding protein C.	Uncharacterized protein.	0.999
LOC100180665	F6UJF1_CIOIN	ENSCINP00000010644	ENSCINP00000003434	Ras-related GTP-binding protein C.	UDENN FLCN/SMCR8-type domain-containing protein.	0.993
LOC100180665	LOC100177011	ENSCINP00000010644	ENSCINP00000023727	Ras-related GTP-binding protein C.	Ragulator complex protein LAMTOR2-B.	0.994
LOC100180665	LOC100181499	ENSCINP00000010644	ENSCINP00000035422	Ras-related GTP-binding protein C.	Uncharacterized protein LOC100181499.	0.992
LOC100180665	LOC100186482	ENSCINP00000010644	ENSCINP00000013975	Ras-related GTP-binding protein C.	Sodium-coupled neutral amino acid transporter 9-like.	0.911