(25 nodes) Response to amino acid starvation, and Peptidase S26 network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100178515	Probable signal peptidase complex subunit 2. (184 aa)
	F6SPE4_CIOIN	Uncharacterized protein. (185 aa)
	LOC100185667	Uncharacterized protein LOC100185667. (1094 aa)
	F6ZLY9_CIOIN	Uncharacterized protein. (343 aa)
	F6T2X1_CIOIN	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (367 aa)
	F6WDL8_CIOIN	DEP domain-containing protein. (565 aa)
	L7N0S6_CIOIN	Signal peptidase complex catalytic subunit SEC11. (182 aa)
	F7ARU3_CIOIN	Uncharacterized protein. (444 aa)
	F6T7E5_CIOIN	Uncharacterized protein. (478 aa)
	ci-zf(ring)-3	Uncharacterized protein. (996 aa)
	LOC100184661	Signal peptidase complex subunit 3. (177 aa)
	F6WK69_CIOIN	WD_REPEATS_REGION domain-containing protein. (805 aa)
	LOC108950015	Mitochondrial inner membrane protease subunit 2-like. (217 aa)
	F6V675_CIOIN	DUF4708 domain-containing protein. (317 aa)
	LOC100183442	GATOR complex protein NPRL2-like. (392 aa)
	F6YWN9_CIOIN	DM domain-containing protein. (625 aa)
	LOC100175829	KICSTOR complex protein C12orf66 homolog. (440 aa)
	F6SWJ9_CIOIN	Uncharacterized protein. (130 aa)
	F6VW40_CIOIN	Zinc_ribbon_16 domain-containing protein. (901 aa)
	LOC100183780	Signal peptidase complex catalytic subunit SEC11. (179 aa)
	LOC100185310	S-adenosylmethionine sensor upstream of mTORC1; S-adenosyl-L-methionine-binding protein that acts as an inhibitor of mTORC1 signaling. Acts as a sensor of S-adenosyl-L- methionine to signal methionine sufficiency to mTORC1. Probably also acts as a S-adenosyl-L-methionine-dependent methyltransferase. (332 aa)
	H2XSU3_CIOIN	Uncharacterized protein. (704 aa)
	H2XX21_CIOIN	Uncharacterized protein. (276 aa)
	LOC100186321	Mitochondrial inner membrane protease subunit. (158 aa)
	H2XZZ2_CIOIN	S-adenosylmethionine sensor upstream of mTORC1; S-adenosyl-L-methionine-binding protein that acts as an inhibitor of mTORC1 signaling. Acts as a sensor of S-adenosyl-L- methionine to signal methionine sufficiency to mTORC1. Probably also acts as a S-adenosyl-L-methionine-dependent methyltransferase. (332 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SPE4_CIOIN	F6SWJ9_CIOIN	ENSCINP00000006820	ENSCINP00000026601	Uncharacterized protein.	Uncharacterized protein.	0.880
F6SPE4_CIOIN	F6T2X1_CIOIN	ENSCINP00000006820	ENSCINP00000012406	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.993
F6SPE4_CIOIN	F6T7E5_CIOIN	ENSCINP00000006820	ENSCINP00000015711	Uncharacterized protein.	Uncharacterized protein.	0.798
F6SPE4_CIOIN	F6V675_CIOIN	ENSCINP00000006820	ENSCINP00000024041	Uncharacterized protein.	DUF4708 domain-containing protein.	0.411
F6SPE4_CIOIN	F6VW40_CIOIN	ENSCINP00000006820	ENSCINP00000027686	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.968
F6SPE4_CIOIN	F6WDL8_CIOIN	ENSCINP00000006820	ENSCINP00000012619	Uncharacterized protein.	DEP domain-containing protein.	0.993
F6SPE4_CIOIN	F6WK69_CIOIN	ENSCINP00000006820	ENSCINP00000022500	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
F6SPE4_CIOIN	F6YWN9_CIOIN	ENSCINP00000006820	ENSCINP00000024566	Uncharacterized protein.	DM domain-containing protein.	0.476
F6SPE4_CIOIN	F6ZLY9_CIOIN	ENSCINP00000006820	ENSCINP00000008139	Uncharacterized protein.	Uncharacterized protein.	0.968
F6SPE4_CIOIN	F7ARU3_CIOIN	ENSCINP00000006820	ENSCINP00000013737	Uncharacterized protein.	Uncharacterized protein.	0.689
F6SPE4_CIOIN	H2XSU3_CIOIN	ENSCINP00000006820	ENSCINP00000032727	Uncharacterized protein.	Uncharacterized protein.	0.940
F6SPE4_CIOIN	H2XX21_CIOIN	ENSCINP00000006820	ENSCINP00000034205	Uncharacterized protein.	Uncharacterized protein.	0.993
F6SPE4_CIOIN	H2XZZ2_CIOIN	ENSCINP00000006820	ENSCINP00000035226	Uncharacterized protein.	S-adenosylmethionine sensor upstream of mTORC1; S-adenosyl-L-methionine-binding protein that acts as an inhibitor of mTORC1 signaling. Acts as a sensor of S-adenosyl-L- methionine to signal methionine sufficiency to mTORC1. Probably also acts as a S-adenosyl-L-methionine-dependent methyltransferase.	0.556
F6SPE4_CIOIN	L7N0S6_CIOIN	ENSCINP00000006820	ENSCINP00000012809	Uncharacterized protein.	Signal peptidase complex catalytic subunit SEC11.	0.433
F6SPE4_CIOIN	LOC100175829	ENSCINP00000006820	ENSCINP00000025040	Uncharacterized protein.	KICSTOR complex protein C12orf66 homolog.	0.729
F6SPE4_CIOIN	LOC100183442	ENSCINP00000006820	ENSCINP00000024345	Uncharacterized protein.	GATOR complex protein NPRL2-like.	0.999
F6SPE4_CIOIN	LOC100183780	ENSCINP00000006820	ENSCINP00000029455	Uncharacterized protein.	Signal peptidase complex catalytic subunit SEC11.	0.433
F6SPE4_CIOIN	LOC100185310	ENSCINP00000006820	ENSCINP00000032465	Uncharacterized protein.	S-adenosylmethionine sensor upstream of mTORC1; S-adenosyl-L-methionine-binding protein that acts as an inhibitor of mTORC1 signaling. Acts as a sensor of S-adenosyl-L- methionine to signal methionine sufficiency to mTORC1. Probably also acts as a S-adenosyl-L-methionine-dependent methyltransferase.	0.556
F6SPE4_CIOIN	LOC100185667	ENSCINP00000006820	ENSCINP00000008120	Uncharacterized protein.	Uncharacterized protein LOC100185667.	0.481
F6SPE4_CIOIN	LOC100186321	ENSCINP00000006820	ENSCINP00000034801	Uncharacterized protein.	Mitochondrial inner membrane protease subunit.	0.560