(11 nodes) Mixed, incl. Positive regulation of centriole replication, and MYCBP-associated protein network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7B2Z0_CIOIN	Uncharacterized protein. (686 aa)
	LOC100179647	Centrosomal protein POC5. (471 aa)
	F6YAQ4_CIOIN	Uncharacterized protein. (240 aa)
	F6ZM65_CIOIN	WD_REPEATS_REGION domain-containing protein. (483 aa)
	F6QAC7_CIOIN	ASH domain-containing protein. (437 aa)
	F6TJ96_CIOIN	Uncharacterized protein. (200 aa)
	F6XLX0_CIOIN	Uncharacterized protein. (936 aa)
	H2XK78_CIOIN	Uncharacterized protein. (147 aa)
	H2XNA5_CIOIN	Uncharacterized protein. (939 aa)
	LOC100182613	Uncharacterized protein. (507 aa)
	H2XT81_CIOIN	Uncharacterized protein. (177 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QAC7_CIOIN	F6XLX0_CIOIN	ENSCINP00000020451	ENSCINP00000026188	ASH domain-containing protein.	Uncharacterized protein.	0.934
F6QAC7_CIOIN	F6YAQ4_CIOIN	ENSCINP00000020451	ENSCINP00000014170	ASH domain-containing protein.	Uncharacterized protein.	0.524
F6QAC7_CIOIN	F7B2Z0_CIOIN	ENSCINP00000020451	ENSCINP00000005325	ASH domain-containing protein.	Uncharacterized protein.	0.433
F6QAC7_CIOIN	H2XK78_CIOIN	ENSCINP00000020451	ENSCINP00000030060	ASH domain-containing protein.	Uncharacterized protein.	0.448
F6QAC7_CIOIN	LOC100182613	ENSCINP00000020451	ENSCINP00000032227	ASH domain-containing protein.	Uncharacterized protein.	0.535
F6TJ96_CIOIN	F6XLX0_CIOIN	ENSCINP00000021787	ENSCINP00000026188	Uncharacterized protein.	Uncharacterized protein.	0.663
F6TJ96_CIOIN	F6YAQ4_CIOIN	ENSCINP00000021787	ENSCINP00000014170	Uncharacterized protein.	Uncharacterized protein.	0.400
F6TJ96_CIOIN	F6ZM65_CIOIN	ENSCINP00000021787	ENSCINP00000018966	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.418
F6TJ96_CIOIN	F7B2Z0_CIOIN	ENSCINP00000021787	ENSCINP00000005325	Uncharacterized protein.	Uncharacterized protein.	0.423
F6TJ96_CIOIN	H2XNA5_CIOIN	ENSCINP00000021787	ENSCINP00000031138	Uncharacterized protein.	Uncharacterized protein.	0.936
F6TJ96_CIOIN	LOC100182613	ENSCINP00000021787	ENSCINP00000032227	Uncharacterized protein.	Uncharacterized protein.	0.565
F6XLX0_CIOIN	F6QAC7_CIOIN	ENSCINP00000026188	ENSCINP00000020451	Uncharacterized protein.	ASH domain-containing protein.	0.934
F6XLX0_CIOIN	F6TJ96_CIOIN	ENSCINP00000026188	ENSCINP00000021787	Uncharacterized protein.	Uncharacterized protein.	0.663
F6XLX0_CIOIN	F6YAQ4_CIOIN	ENSCINP00000026188	ENSCINP00000014170	Uncharacterized protein.	Uncharacterized protein.	0.928
F6XLX0_CIOIN	F6ZM65_CIOIN	ENSCINP00000026188	ENSCINP00000018966	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.604
F6XLX0_CIOIN	F7B2Z0_CIOIN	ENSCINP00000026188	ENSCINP00000005325	Uncharacterized protein.	Uncharacterized protein.	0.580
F6XLX0_CIOIN	H2XK78_CIOIN	ENSCINP00000026188	ENSCINP00000030060	Uncharacterized protein.	Uncharacterized protein.	0.523
F6XLX0_CIOIN	H2XNA5_CIOIN	ENSCINP00000026188	ENSCINP00000031138	Uncharacterized protein.	Uncharacterized protein.	0.663
F6XLX0_CIOIN	LOC100182613	ENSCINP00000026188	ENSCINP00000032227	Uncharacterized protein.	Uncharacterized protein.	0.688
F6YAQ4_CIOIN	F6QAC7_CIOIN	ENSCINP00000014170	ENSCINP00000020451	Uncharacterized protein.	ASH domain-containing protein.	0.524