(8 nodes) Mixed, incl. Granulin, and ADP transport network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101242267	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	LOC100178400	Uncharacterized protein. (212 aa)
	F6PSZ6_CIOIN	Uncharacterized protein. (205 aa)
	F6PSX9_CIOIN	Uncharacterized protein. (240 aa)
	LOC100176157	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)
	LOC100184687	UPF0428 protein CXorf56 homolog. (216 aa)
	H2XS68_CIOIN	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
	H2XVV3_CIOIN	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (297 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PSX9_CIOIN	H2XS68_CIOIN	ENSCINP00000023895	ENSCINP00000032502	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
F6PSX9_CIOIN	H2XVV3_CIOIN	ENSCINP00000023895	ENSCINP00000033787	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
F6PSX9_CIOIN	LOC100176157	ENSCINP00000023895	ENSCINP00000025857	Uncharacterized protein.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.476
F6PSX9_CIOIN	LOC100178400	ENSCINP00000023895	ENSCINP00000015117	Uncharacterized protein.	Uncharacterized protein.	0.476
F6PSX9_CIOIN	LOC100184687	ENSCINP00000023895	ENSCINP00000026580	Uncharacterized protein.	UPF0428 protein CXorf56 homolog.	0.476
F6PSZ6_CIOIN	H2XS68_CIOIN	ENSCINP00000023893	ENSCINP00000032502	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
F6PSZ6_CIOIN	H2XVV3_CIOIN	ENSCINP00000023893	ENSCINP00000033787	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
F6PSZ6_CIOIN	LOC100176157	ENSCINP00000023893	ENSCINP00000025857	Uncharacterized protein.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.476
F6PSZ6_CIOIN	LOC100178400	ENSCINP00000023893	ENSCINP00000015117	Uncharacterized protein.	Uncharacterized protein.	0.476
F6PSZ6_CIOIN	LOC100184687	ENSCINP00000023893	ENSCINP00000026580	Uncharacterized protein.	UPF0428 protein CXorf56 homolog.	0.476
H2XS68_CIOIN	F6PSX9_CIOIN	ENSCINP00000032502	ENSCINP00000023895	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.424
H2XS68_CIOIN	F6PSZ6_CIOIN	ENSCINP00000032502	ENSCINP00000023893	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.424
H2XS68_CIOIN	LOC100176157	ENSCINP00000032502	ENSCINP00000025857	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.551
H2XS68_CIOIN	LOC100178400	ENSCINP00000032502	ENSCINP00000015117	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.459
H2XS68_CIOIN	LOC100184687	ENSCINP00000032502	ENSCINP00000026580	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	UPF0428 protein CXorf56 homolog.	0.459
H2XS68_CIOIN	LOC101242267	ENSCINP00000032502	ENSCINP00000007136	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.425
H2XVV3_CIOIN	F6PSX9_CIOIN	ENSCINP00000033787	ENSCINP00000023895	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.424
H2XVV3_CIOIN	F6PSZ6_CIOIN	ENSCINP00000033787	ENSCINP00000023893	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.424
H2XVV3_CIOIN	LOC100176157	ENSCINP00000033787	ENSCINP00000025857	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.551
H2XVV3_CIOIN	LOC100178400	ENSCINP00000033787	ENSCINP00000015117	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.459