STRINGSTRING
LOC100187142 LOC100187142 LOC100178428 LOC100178428 F7BMU6_CIOIN F7BMU6_CIOIN LOC100183285 LOC100183285 gh18 gh18 LOC100182270 LOC100182270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100187142Beta-hexosaminidase. (535 aa)
LOC100178428Beta-hexosaminidase. (538 aa)
F7BMU6_CIOINUncharacterized protein. (403 aa)
LOC100183285BcrAD_BadFG domain-containing protein. (341 aa)
gh18Chitinase precursor; Belongs to the glycosyl hydrolase 18 family. (648 aa)
LOC100182270Alpha-galactosidase. (417 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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