(10 nodes) Est1/Ebs1-like, and TORC1 complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7ALJ6_CIOIN	Uncharacterized protein. (886 aa)
	F6V093_CIOIN	Uncharacterized protein. (325 aa)
	F6WCU4_CIOIN	Uncharacterized protein. (954 aa)
	F6PIQ0_CIOIN	PINc domain-containing protein. (485 aa)
	H2XMY5_CIOIN	Uncharacterized protein. (281 aa)
	H2XV25_CIOIN	Uncharacterized protein. (652 aa)
	H2XWC2_CIOIN	DUF2439 domain-containing protein. (221 aa)
	H2Y0W5_CIOIN	FATC domain-containing protein. (201 aa)
	H2Y1C1_CIOIN	Uncharacterized protein. (801 aa)
	H2Y3J0_CIOIN	Uncharacterized protein. (176 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PIQ0_CIOIN	F6V093_CIOIN	ENSCINP00000020219	ENSCINP00000014270	PINc domain-containing protein.	Uncharacterized protein.	0.875
F6PIQ0_CIOIN	F6WCU4_CIOIN	ENSCINP00000020219	ENSCINP00000017766	PINc domain-containing protein.	Uncharacterized protein.	0.894
F6PIQ0_CIOIN	F7ALJ6_CIOIN	ENSCINP00000020219	ENSCINP00000008687	PINc domain-containing protein.	Uncharacterized protein.	0.641
F6PIQ0_CIOIN	H2XMY5_CIOIN	ENSCINP00000020219	ENSCINP00000031018	PINc domain-containing protein.	Uncharacterized protein.	0.444
F6PIQ0_CIOIN	H2XV25_CIOIN	ENSCINP00000020219	ENSCINP00000033509	PINc domain-containing protein.	Uncharacterized protein.	0.444
F6PIQ0_CIOIN	H2XWC2_CIOIN	ENSCINP00000020219	ENSCINP00000033956	PINc domain-containing protein.	DUF2439 domain-containing protein.	0.632
F6PIQ0_CIOIN	H2Y0W5_CIOIN	ENSCINP00000020219	ENSCINP00000035549	PINc domain-containing protein.	FATC domain-containing protein.	0.444
F6PIQ0_CIOIN	H2Y1C1_CIOIN	ENSCINP00000020219	ENSCINP00000035705	PINc domain-containing protein.	Uncharacterized protein.	0.632
F6PIQ0_CIOIN	H2Y3J0_CIOIN	ENSCINP00000020219	ENSCINP00000036475	PINc domain-containing protein.	Uncharacterized protein.	0.961
F6V093_CIOIN	F6PIQ0_CIOIN	ENSCINP00000014270	ENSCINP00000020219	Uncharacterized protein.	PINc domain-containing protein.	0.875
F6V093_CIOIN	F6WCU4_CIOIN	ENSCINP00000014270	ENSCINP00000017766	Uncharacterized protein.	Uncharacterized protein.	0.950
F6V093_CIOIN	F7ALJ6_CIOIN	ENSCINP00000014270	ENSCINP00000008687	Uncharacterized protein.	Uncharacterized protein.	0.751
F6V093_CIOIN	H2XMY5_CIOIN	ENSCINP00000014270	ENSCINP00000031018	Uncharacterized protein.	Uncharacterized protein.	0.842
F6V093_CIOIN	H2XV25_CIOIN	ENSCINP00000014270	ENSCINP00000033509	Uncharacterized protein.	Uncharacterized protein.	0.842
F6V093_CIOIN	H2XWC2_CIOIN	ENSCINP00000014270	ENSCINP00000033956	Uncharacterized protein.	DUF2439 domain-containing protein.	0.733
F6V093_CIOIN	H2Y0W5_CIOIN	ENSCINP00000014270	ENSCINP00000035549	Uncharacterized protein.	FATC domain-containing protein.	0.842
F6V093_CIOIN	H2Y1C1_CIOIN	ENSCINP00000014270	ENSCINP00000035705	Uncharacterized protein.	Uncharacterized protein.	0.733
F6V093_CIOIN	H2Y3J0_CIOIN	ENSCINP00000014270	ENSCINP00000036475	Uncharacterized protein.	Uncharacterized protein.	0.875
F6WCU4_CIOIN	F6PIQ0_CIOIN	ENSCINP00000017766	ENSCINP00000020219	Uncharacterized protein.	PINc domain-containing protein.	0.894
F6WCU4_CIOIN	F6V093_CIOIN	ENSCINP00000017766	ENSCINP00000014270	Uncharacterized protein.	Uncharacterized protein.	0.950