(26 nodes) Mixed, incl. Macro domain, and STAT family protein binding network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6Q2Q3_CIOIN	BTB domain-containing protein. (590 aa)
	F7AKQ9_CIOIN	Poly [ADP-ribose] polymerase. (546 aa)
	F6WSD2_CIOIN	BSD domain-containing protein. (400 aa)
	F6QM01_CIOIN	Macro domain-containing protein. (247 aa)
	F6R497_CIOIN	Poly [ADP-ribose] polymerase. (353 aa)
	F6SQE1_CIOIN	Uncharacterized protein. (651 aa)
	F6SQA2_CIOIN	DTC domain-containing protein. (81 aa)
	F6SQ79_CIOIN	RING-type domain-containing protein. (190 aa)
	LOC100186901	Poly [ADP-ribose] polymerase. (326 aa)
	F7B9N2_CIOIN	Uncharacterized protein. (859 aa)
	F6WV94_CIOIN	zf-3CxxC domain-containing protein. (437 aa)
	F6YBZ2_CIOIN	Poly [ADP-ribose] polymerase. (381 aa)
	F6RJ04_CIOIN	Macro domain-containing protein. (338 aa)
	LOC100186957	Receptor-interacting serine/threonine-protein kinase 1-like. (571 aa)
	LOC100176866	E3 ubiquitin-protein ligase MARCH4-like. (211 aa)
	F6U0A7_CIOIN	Poly [ADP-ribose] polymerase. (528 aa)
	F6SYT5_CIOIN	Macro domain-containing protein. (358 aa)
	F6WIP7_CIOIN	Macro domain-containing protein. (457 aa)
	F6WHH4_CIOIN	BRCT domain-containing protein. (198 aa)
	LOC100186293	Poly [ADP-ribose] polymerase. (132 aa)
	H2XRC4_CIOIN	Uncharacterized protein. (351 aa)
	H2XX82_CIOIN	Macro domain-containing protein. (333 aa)
	H2XXS2_CIOIN	Macro domain-containing protein. (146 aa)
	H2XY94_CIOIN	Macro domain-containing protein. (202 aa)
	H2XYT4_CIOIN	Uncharacterized protein. (423 aa)
	H2XZF6_CIOIN	Macro domain-containing protein. (224 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6Q2Q3_CIOIN	F6RJ04_CIOIN	ENSCINP00000001344	ENSCINP00000025444	BTB domain-containing protein.	Macro domain-containing protein.	0.491
F6QM01_CIOIN	F6SQ79_CIOIN	ENSCINP00000004900	ENSCINP00000006521	Macro domain-containing protein.	RING-type domain-containing protein.	0.472
F6QM01_CIOIN	F6SQE1_CIOIN	ENSCINP00000004900	ENSCINP00000006511	Macro domain-containing protein.	Uncharacterized protein.	0.599
F6R497_CIOIN	F6SQ79_CIOIN	ENSCINP00000006033	ENSCINP00000006521	Poly [ADP-ribose] polymerase.	RING-type domain-containing protein.	0.474
F6R497_CIOIN	F6SQE1_CIOIN	ENSCINP00000006033	ENSCINP00000006511	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.472
F6RJ04_CIOIN	F6Q2Q3_CIOIN	ENSCINP00000025444	ENSCINP00000001344	Macro domain-containing protein.	BTB domain-containing protein.	0.491
F6RJ04_CIOIN	F6SQE1_CIOIN	ENSCINP00000025444	ENSCINP00000006511	Macro domain-containing protein.	Uncharacterized protein.	0.434
F6RJ04_CIOIN	H2XRC4_CIOIN	ENSCINP00000025444	ENSCINP00000032208	Macro domain-containing protein.	Uncharacterized protein.	0.483
F6SQ79_CIOIN	F6QM01_CIOIN	ENSCINP00000006521	ENSCINP00000004900	RING-type domain-containing protein.	Macro domain-containing protein.	0.472
F6SQ79_CIOIN	F6R497_CIOIN	ENSCINP00000006521	ENSCINP00000006033	RING-type domain-containing protein.	Poly [ADP-ribose] polymerase.	0.474
F6SQ79_CIOIN	F6YBZ2_CIOIN	ENSCINP00000006521	ENSCINP00000024846	RING-type domain-containing protein.	Poly [ADP-ribose] polymerase.	0.472
F6SQ79_CIOIN	H2XX82_CIOIN	ENSCINP00000006521	ENSCINP00000034266	RING-type domain-containing protein.	Macro domain-containing protein.	0.585
F6SQ79_CIOIN	H2XZF6_CIOIN	ENSCINP00000006521	ENSCINP00000035040	RING-type domain-containing protein.	Macro domain-containing protein.	0.585
F6SQE1_CIOIN	F6QM01_CIOIN	ENSCINP00000006511	ENSCINP00000004900	Uncharacterized protein.	Macro domain-containing protein.	0.599
F6SQE1_CIOIN	F6R497_CIOIN	ENSCINP00000006511	ENSCINP00000006033	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.472
F6SQE1_CIOIN	F6RJ04_CIOIN	ENSCINP00000006511	ENSCINP00000025444	Uncharacterized protein.	Macro domain-containing protein.	0.434
F6SQE1_CIOIN	F6SYT5_CIOIN	ENSCINP00000006511	ENSCINP00000026301	Uncharacterized protein.	Macro domain-containing protein.	0.433
F6SQE1_CIOIN	F6U0A7_CIOIN	ENSCINP00000006511	ENSCINP00000025617	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.506
F6SQE1_CIOIN	F6YBZ2_CIOIN	ENSCINP00000006511	ENSCINP00000024846	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.712
F6SQE1_CIOIN	F7AKQ9_CIOIN	ENSCINP00000006511	ENSCINP00000003812	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.577