(5 nodes) STAT family protein binding, and Macro domain network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6SQE1_CIOIN	Uncharacterized protein. (651 aa)
	F6SQ79_CIOIN	RING-type domain-containing protein. (190 aa)
	F6YBZ2_CIOIN	Poly [ADP-ribose] polymerase. (381 aa)
	H2XX82_CIOIN	Macro domain-containing protein. (333 aa)
	H2XZF6_CIOIN	Macro domain-containing protein. (224 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SQ79_CIOIN	F6YBZ2_CIOIN	ENSCINP00000006521	ENSCINP00000024846	RING-type domain-containing protein.	Poly [ADP-ribose] polymerase.	0.472
F6SQ79_CIOIN	H2XX82_CIOIN	ENSCINP00000006521	ENSCINP00000034266	RING-type domain-containing protein.	Macro domain-containing protein.	0.585
F6SQ79_CIOIN	H2XZF6_CIOIN	ENSCINP00000006521	ENSCINP00000035040	RING-type domain-containing protein.	Macro domain-containing protein.	0.585
F6SQE1_CIOIN	F6YBZ2_CIOIN	ENSCINP00000006511	ENSCINP00000024846	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.712
F6SQE1_CIOIN	H2XX82_CIOIN	ENSCINP00000006511	ENSCINP00000034266	Uncharacterized protein.	Macro domain-containing protein.	0.700
F6SQE1_CIOIN	H2XZF6_CIOIN	ENSCINP00000006511	ENSCINP00000035040	Uncharacterized protein.	Macro domain-containing protein.	0.834
F6YBZ2_CIOIN	F6SQ79_CIOIN	ENSCINP00000024846	ENSCINP00000006521	Poly [ADP-ribose] polymerase.	RING-type domain-containing protein.	0.472
F6YBZ2_CIOIN	F6SQE1_CIOIN	ENSCINP00000024846	ENSCINP00000006511	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.712
H2XX82_CIOIN	F6SQ79_CIOIN	ENSCINP00000034266	ENSCINP00000006521	Macro domain-containing protein.	RING-type domain-containing protein.	0.585
H2XX82_CIOIN	F6SQE1_CIOIN	ENSCINP00000034266	ENSCINP00000006511	Macro domain-containing protein.	Uncharacterized protein.	0.700
H2XZF6_CIOIN	F6SQ79_CIOIN	ENSCINP00000035040	ENSCINP00000006521	Macro domain-containing protein.	RING-type domain-containing protein.	0.585
H2XZF6_CIOIN	F6SQE1_CIOIN	ENSCINP00000035040	ENSCINP00000006511	Macro domain-containing protein.	Uncharacterized protein.	0.834