(7 nodes) Tetraspanin, animals, and Metallo-peptidase family M12 network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6RRU7_CIOIN	ZnMc domain-containing protein. (540 aa)
	F6YIG5_CIOIN	Tetraspanin. (261 aa)
	F6WHA2_CIOIN	Tetraspanin. (241 aa)
	F6Y9D9_CIOIN	Uncharacterized protein. (768 aa)
	F6VBG0_CIOIN	Peptidase S1 domain-containing protein. (246 aa)
	H2XMX1_CIOIN	Tetraspanin. (270 aa)
	LOC100181945	Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family. (221 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RRU7_CIOIN	F6VBG0_CIOIN	ENSCINP00000013119	ENSCINP00000022549	ZnMc domain-containing protein.	Peptidase S1 domain-containing protein.	0.572
F6RRU7_CIOIN	F6Y9D9_CIOIN	ENSCINP00000013119	ENSCINP00000019328	ZnMc domain-containing protein.	Uncharacterized protein.	0.576
F6VBG0_CIOIN	F6RRU7_CIOIN	ENSCINP00000022549	ENSCINP00000013119	Peptidase S1 domain-containing protein.	ZnMc domain-containing protein.	0.572
F6VBG0_CIOIN	F6Y9D9_CIOIN	ENSCINP00000022549	ENSCINP00000019328	Peptidase S1 domain-containing protein.	Uncharacterized protein.	0.484
F6Y9D9_CIOIN	F6RRU7_CIOIN	ENSCINP00000019328	ENSCINP00000013119	Uncharacterized protein.	ZnMc domain-containing protein.	0.576
F6Y9D9_CIOIN	F6VBG0_CIOIN	ENSCINP00000019328	ENSCINP00000022549	Uncharacterized protein.	Peptidase S1 domain-containing protein.	0.484
F6Y9D9_CIOIN	H2XMX1_CIOIN	ENSCINP00000019328	ENSCINP00000031004	Uncharacterized protein.	Tetraspanin.	0.653
H2XMX1_CIOIN	F6Y9D9_CIOIN	ENSCINP00000031004	ENSCINP00000019328	Tetraspanin.	Uncharacterized protein.	0.653
H2XMX1_CIOIN	LOC100181945	ENSCINP00000031004	ENSCINP00000033498	Tetraspanin.	Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family.	0.483
LOC100181945	H2XMX1_CIOIN	ENSCINP00000033498	ENSCINP00000031004	Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family.	Tetraspanin.	0.483