(23 nodes) Protein O-linked glycosylation network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7A693_CIOIN	ILEI domain-containing protein. (647 aa)
	F6PLX9_CIOIN	Uncharacterized protein. (389 aa)
	LOC100181205	Protein O-mannosyl-transferase 1-like isoform X1. (664 aa)
	F7B8N2_CIOIN	Uncharacterized protein. (356 aa)
	F6SIM0_CIOIN	PIP49_C domain-containing protein. (326 aa)
	LOC100176443	Xyloside xylosyltransferase 1. (397 aa)
	Aer61	Uncharacterized protein. (416 aa)
	Aer61b	Uncharacterized protein. (503 aa)
	F6WBG2_CIOIN	Uncharacterized protein. (624 aa)
	fut13	Fut13 protein precursor. (434 aa)
	F7AFC6_CIOIN	PMT domain-containing protein. (228 aa)
	F6ZXT3_CIOIN	PMT_4TMC domain-containing protein. (202 aa)
	F6VWI8_CIOIN	Uncharacterized protein. (91 aa)
	LOC100176976	Uncharacterized protein. (515 aa)
	LOC100183936	Beta-1,4-glucuronyltransferase 1 isoform X1. (427 aa)
	H2XRM1_CIOIN	Uncharacterized protein. (613 aa)
	H2XU71_CIOIN	Uncharacterized protein. (319 aa)
	H2XY73_CIOIN	CAP10 domain-containing protein. (119 aa)
	H2XYC6_CIOIN	Uncharacterized protein. (366 aa)
	H2Y0L1_CIOIN	CAP10 domain-containing protein. (242 aa)
	H2Y1K5_CIOIN	Uncharacterized protein. (469 aa)
	H2Y2W3_CIOIN	Hexosyltransferase. (481 aa)
	H2Y3N3_CIOIN	Protein kinase domain-containing protein. (340 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Aer61	LOC100176976	ENSCINP00000017051	ENSCINP00000027667	Uncharacterized protein.	Uncharacterized protein.	0.904
F6PLX9_CIOIN	H2XY73_CIOIN	ENSCINP00000009868	ENSCINP00000034607	Uncharacterized protein.	CAP10 domain-containing protein.	0.496
F6PLX9_CIOIN	H2Y0L1_CIOIN	ENSCINP00000009868	ENSCINP00000035445	Uncharacterized protein.	CAP10 domain-containing protein.	0.496
F6PLX9_CIOIN	LOC100176443	ENSCINP00000009868	ENSCINP00000016452	Uncharacterized protein.	Xyloside xylosyltransferase 1.	0.470
F6PLX9_CIOIN	fut13	ENSCINP00000009868	ENSCINP00000025125	Uncharacterized protein.	Fut13 protein precursor.	0.955
F6SIM0_CIOIN	F7A693_CIOIN	ENSCINP00000015774	ENSCINP00000006933	PIP49_C domain-containing protein.	ILEI domain-containing protein.	0.417
F6SIM0_CIOIN	F7AFC6_CIOIN	ENSCINP00000015774	ENSCINP00000026044	PIP49_C domain-containing protein.	PMT domain-containing protein.	0.441
F6SIM0_CIOIN	F7B8N2_CIOIN	ENSCINP00000015774	ENSCINP00000015230	PIP49_C domain-containing protein.	Uncharacterized protein.	0.444
F6SIM0_CIOIN	H2Y1K5_CIOIN	ENSCINP00000015774	ENSCINP00000035789	PIP49_C domain-containing protein.	Uncharacterized protein.	0.563
F6SIM0_CIOIN	H2Y2W3_CIOIN	ENSCINP00000015774	ENSCINP00000036248	PIP49_C domain-containing protein.	Hexosyltransferase.	0.474
F6SIM0_CIOIN	LOC100181205	ENSCINP00000015774	ENSCINP00000013132	PIP49_C domain-containing protein.	Protein O-mannosyl-transferase 1-like isoform X1.	0.465
F6WBG2_CIOIN	H2XRM1_CIOIN	ENSCINP00000019090	ENSCINP00000032305	Uncharacterized protein.	Uncharacterized protein.	0.905
F6WBG2_CIOIN	H2XU71_CIOIN	ENSCINP00000019090	ENSCINP00000033205	Uncharacterized protein.	Uncharacterized protein.	0.946
F6WBG2_CIOIN	H2XYC6_CIOIN	ENSCINP00000019090	ENSCINP00000034660	Uncharacterized protein.	Uncharacterized protein.	0.946
F6WBG2_CIOIN	LOC100183936	ENSCINP00000019090	ENSCINP00000031165	Uncharacterized protein.	Beta-1,4-glucuronyltransferase 1 isoform X1.	0.946
F6ZXT3_CIOIN	F7A693_CIOIN	ENSCINP00000026045	ENSCINP00000006933	PMT_4TMC domain-containing protein.	ILEI domain-containing protein.	0.945
F6ZXT3_CIOIN	F7AFC6_CIOIN	ENSCINP00000026045	ENSCINP00000026044	PMT_4TMC domain-containing protein.	PMT domain-containing protein.	0.938
F6ZXT3_CIOIN	F7B8N2_CIOIN	ENSCINP00000026045	ENSCINP00000015230	PMT_4TMC domain-containing protein.	Uncharacterized protein.	0.416
F6ZXT3_CIOIN	H2Y1K5_CIOIN	ENSCINP00000026045	ENSCINP00000035789	PMT_4TMC domain-containing protein.	Uncharacterized protein.	0.490
F6ZXT3_CIOIN	H2Y2W3_CIOIN	ENSCINP00000026045	ENSCINP00000036248	PMT_4TMC domain-containing protein.	Hexosyltransferase.	0.408