(12 nodes) Glycosphingolipid biosynthesis - lacto and neolacto series network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6X2H2_CIOIN	Uncharacterized protein. (323 aa)
	F7AB40_CIOIN	Uncharacterized protein. (375 aa)
	F7A738_CIOIN	Uncharacterized protein. (247 aa)
	LOC100181252-2	Uncharacterized protein. (413 aa)
	F6W819_CIOIN	Hexosyltransferase. (326 aa)
	LOC100184787	Hexosyltransferase. (332 aa)
	LOC100180134	Hexosyltransferase. (396 aa)
	H2XRS7_CIOIN	Hexosyltransferase. (239 aa)
	LOC100180782	Hexosyltransferase. (298 aa)
	H2XTZ0_CIOIN	Hexosyltransferase. (336 aa)
	H2XVC8_CIOIN	Hexosyltransferase. (251 aa)
	H2XZT2_CIOIN	Hexosyltransferase. (240 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6W819_CIOIN	F6X2H2_CIOIN	ENSCINP00000021980	ENSCINP00000005191	Hexosyltransferase.	Uncharacterized protein.	0.651
F6W819_CIOIN	F7A738_CIOIN	ENSCINP00000021980	ENSCINP00000010179	Hexosyltransferase.	Uncharacterized protein.	0.651
F6W819_CIOIN	F7AB40_CIOIN	ENSCINP00000021980	ENSCINP00000009098	Hexosyltransferase.	Uncharacterized protein.	0.651
F6W819_CIOIN	H2XTZ0_CIOIN	ENSCINP00000021980	ENSCINP00000033124	Hexosyltransferase.	Hexosyltransferase.	0.911
F6W819_CIOIN	H2XVC8_CIOIN	ENSCINP00000021980	ENSCINP00000033612	Hexosyltransferase.	Hexosyltransferase.	0.904
F6W819_CIOIN	LOC100181252-2	ENSCINP00000021980	ENSCINP00000020931	Hexosyltransferase.	Uncharacterized protein.	0.651
F6W819_CIOIN	LOC100184787	ENSCINP00000021980	ENSCINP00000031042	Hexosyltransferase.	Hexosyltransferase.	0.906
F6X2H2_CIOIN	F6W819_CIOIN	ENSCINP00000005191	ENSCINP00000021980	Uncharacterized protein.	Hexosyltransferase.	0.651
F6X2H2_CIOIN	H2XRS7_CIOIN	ENSCINP00000005191	ENSCINP00000032361	Uncharacterized protein.	Hexosyltransferase.	0.659
F6X2H2_CIOIN	H2XTZ0_CIOIN	ENSCINP00000005191	ENSCINP00000033124	Uncharacterized protein.	Hexosyltransferase.	0.902
F6X2H2_CIOIN	H2XVC8_CIOIN	ENSCINP00000005191	ENSCINP00000033612	Uncharacterized protein.	Hexosyltransferase.	0.902
F6X2H2_CIOIN	H2XZT2_CIOIN	ENSCINP00000005191	ENSCINP00000035166	Uncharacterized protein.	Hexosyltransferase.	0.651
F6X2H2_CIOIN	LOC100180134	ENSCINP00000005191	ENSCINP00000031780	Uncharacterized protein.	Hexosyltransferase.	0.659
F6X2H2_CIOIN	LOC100180782	ENSCINP00000005191	ENSCINP00000032528	Uncharacterized protein.	Hexosyltransferase.	0.659
F6X2H2_CIOIN	LOC100184787	ENSCINP00000005191	ENSCINP00000031042	Uncharacterized protein.	Hexosyltransferase.	0.902
F7A738_CIOIN	F6W819_CIOIN	ENSCINP00000010179	ENSCINP00000021980	Uncharacterized protein.	Hexosyltransferase.	0.651
F7A738_CIOIN	H2XRS7_CIOIN	ENSCINP00000010179	ENSCINP00000032361	Uncharacterized protein.	Hexosyltransferase.	0.659
F7A738_CIOIN	H2XTZ0_CIOIN	ENSCINP00000010179	ENSCINP00000033124	Uncharacterized protein.	Hexosyltransferase.	0.902
F7A738_CIOIN	H2XVC8_CIOIN	ENSCINP00000010179	ENSCINP00000033612	Uncharacterized protein.	Hexosyltransferase.	0.902
F7A738_CIOIN	H2XZT2_CIOIN	ENSCINP00000010179	ENSCINP00000035166	Uncharacterized protein.	Hexosyltransferase.	0.651