STRINGSTRING
LOC100175865 LOC100175865 F6ZQY6_CIOIN F6ZQY6_CIOIN F6QM85_CIOIN F6QM85_CIOIN H2XW90_CIOIN H2XW90_CIOIN H2XXR3_CIOIN H2XXR3_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100175865Histone PARylation factor 1. (339 aa)
F6ZQY6_CIOINPoly [ADP-ribose] polymerase. (537 aa)
F6QM85_CIOINUncharacterized protein. (505 aa)
H2XW90_CIOINUncharacterized protein. (92 aa)
H2XXR3_CIOINPoly [ADP-ribose] polymerase. (472 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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