(5 nodes) BRISC complex, and ATP-dependent protease La (LON) substrate-binding domain network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6WPB7_CIOIN	BRCC36_C domain-containing protein. (108 aa)
	F6SA18_CIOIN	Uncharacterized protein. (643 aa)
	H2XLY1_CIOIN	Uncharacterized protein. (292 aa)
	ENSCINP00000034968	annotation not available (123 aa)
	H2Y1A0_CIOIN	Uncharacterized protein. (345 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCINP00000034968	F6WPB7_CIOIN	ENSCINP00000034968	ENSCINP00000009483	annotation not available	BRCC36_C domain-containing protein.	0.506
ENSCINP00000034968	H2XLY1_CIOIN	ENSCINP00000034968	ENSCINP00000030663	annotation not available	Uncharacterized protein.	0.714
F6SA18_CIOIN	F6WPB7_CIOIN	ENSCINP00000026615	ENSCINP00000009483	Uncharacterized protein.	BRCC36_C domain-containing protein.	0.407
F6SA18_CIOIN	H2XLY1_CIOIN	ENSCINP00000026615	ENSCINP00000030663	Uncharacterized protein.	Uncharacterized protein.	0.406
F6WPB7_CIOIN	ENSCINP00000034968	ENSCINP00000009483	ENSCINP00000034968	BRCC36_C domain-containing protein.	annotation not available	0.506
F6WPB7_CIOIN	F6SA18_CIOIN	ENSCINP00000009483	ENSCINP00000026615	BRCC36_C domain-containing protein.	Uncharacterized protein.	0.407
F6WPB7_CIOIN	H2XLY1_CIOIN	ENSCINP00000009483	ENSCINP00000030663	BRCC36_C domain-containing protein.	Uncharacterized protein.	0.999
F6WPB7_CIOIN	H2Y1A0_CIOIN	ENSCINP00000009483	ENSCINP00000035684	BRCC36_C domain-containing protein.	Uncharacterized protein.	0.996
H2XLY1_CIOIN	ENSCINP00000034968	ENSCINP00000030663	ENSCINP00000034968	Uncharacterized protein.	annotation not available	0.714
H2XLY1_CIOIN	F6SA18_CIOIN	ENSCINP00000030663	ENSCINP00000026615	Uncharacterized protein.	Uncharacterized protein.	0.406
H2XLY1_CIOIN	F6WPB7_CIOIN	ENSCINP00000030663	ENSCINP00000009483	Uncharacterized protein.	BRCC36_C domain-containing protein.	0.999
H2XLY1_CIOIN	H2Y1A0_CIOIN	ENSCINP00000030663	ENSCINP00000035684	Uncharacterized protein.	Uncharacterized protein.	0.999
H2Y1A0_CIOIN	F6WPB7_CIOIN	ENSCINP00000035684	ENSCINP00000009483	Uncharacterized protein.	BRCC36_C domain-containing protein.	0.996
H2Y1A0_CIOIN	H2XLY1_CIOIN	ENSCINP00000035684	ENSCINP00000030663	Uncharacterized protein.	Uncharacterized protein.	0.999