STRINGSTRING
F6WRI9_CIOIN F6WRI9_CIOIN F7AHP3_CIOIN F7AHP3_CIOIN H2XLD4_CIOIN H2XLD4_CIOIN H2XLP4_CIOIN H2XLP4_CIOIN H2XWV4_CIOIN H2XWV4_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6WRI9_CIOINHECT domain-containing protein. (533 aa)
F7AHP3_CIOINUncharacterized protein. (2812 aa)
H2XLD4_CIOINWWE domain-containing protein. (154 aa)
H2XLP4_CIOINUncharacterized protein. (455 aa)
H2XWV4_CIOINE3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (75 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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