(6 nodes) Subapical part of cell, and Regulation of neuron maturation network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6WRR9_CIOIN	Uncharacterized protein. (1303 aa)
	H2XQ82_CIOIN	Uncharacterized protein. (217 aa)
	H2XQW5_CIOIN	Uncharacterized protein. (186 aa)
	H2XTN1_CIOIN	Uncharacterized protein. (141 aa)
	H2Y074_CIOIN	Uncharacterized protein. (275 aa)
	H2Y1K9_CIOIN	Uncharacterized protein. (674 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6WRR9_CIOIN	H2Y1K9_CIOIN	ENSCINP00000016304	ENSCINP00000035793	Uncharacterized protein.	Uncharacterized protein.	0.582
H2XQ82_CIOIN	H2XQW5_CIOIN	ENSCINP00000031816	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQ82_CIOIN	H2XTN1_CIOIN	ENSCINP00000031816	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XQ82_CIOIN	H2Y074_CIOIN	ENSCINP00000031816	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.942
H2XQW5_CIOIN	H2XQ82_CIOIN	ENSCINP00000032049	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQW5_CIOIN	H2XTN1_CIOIN	ENSCINP00000032049	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XQW5_CIOIN	H2Y074_CIOIN	ENSCINP00000032049	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.947
H2XTN1_CIOIN	H2XQ82_CIOIN	ENSCINP00000033015	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XTN1_CIOIN	H2XQW5_CIOIN	ENSCINP00000033015	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XTN1_CIOIN	H2Y074_CIOIN	ENSCINP00000033015	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.925
H2Y074_CIOIN	H2XQ82_CIOIN	ENSCINP00000035308	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.942
H2Y074_CIOIN	H2XQW5_CIOIN	ENSCINP00000035308	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.947
H2Y074_CIOIN	H2XTN1_CIOIN	ENSCINP00000035308	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.925
H2Y1K9_CIOIN	F6WRR9_CIOIN	ENSCINP00000035793	ENSCINP00000016304	Uncharacterized protein.	Uncharacterized protein.	0.582