(6 nodes) Leucine catabolic process, and RimK-like ATP-grasp domain network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100185648	Uncharacterized protein. (301 aa)
	F7AHK9_CIOIN	CoA carboxyltransferase N-terminal domain-containing protein. (488 aa)
	F6YQT3_CIOIN	Uncharacterized protein. (678 aa)
	LOC100181141	Uncharacterized protein. (575 aa)
	LOC100181405	Uncharacterized protein. (414 aa)
	H2XSN3_CIOIN	Pyruvate carboxyltransferase domain-containing protein. (323 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6YQT3_CIOIN	F7AHK9_CIOIN	ENSCINP00000007919	ENSCINP00000005637	Uncharacterized protein.	CoA carboxyltransferase N-terminal domain-containing protein.	0.983
F6YQT3_CIOIN	H2XSN3_CIOIN	ENSCINP00000007919	ENSCINP00000032667	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.657
F6YQT3_CIOIN	LOC100181141	ENSCINP00000007919	ENSCINP00000018880	Uncharacterized protein.	Uncharacterized protein.	0.995
F6YQT3_CIOIN	LOC100181405	ENSCINP00000007919	ENSCINP00000030042	Uncharacterized protein.	Uncharacterized protein.	0.963
F6YQT3_CIOIN	LOC100185648	ENSCINP00000007919	ENSCINP00000005607	Uncharacterized protein.	Uncharacterized protein.	0.949
F7AHK9_CIOIN	F6YQT3_CIOIN	ENSCINP00000005637	ENSCINP00000007919	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.983
F7AHK9_CIOIN	H2XSN3_CIOIN	ENSCINP00000005637	ENSCINP00000032667	CoA carboxyltransferase N-terminal domain-containing protein.	Pyruvate carboxyltransferase domain-containing protein.	0.786
F7AHK9_CIOIN	LOC100181141	ENSCINP00000005637	ENSCINP00000018880	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.904
F7AHK9_CIOIN	LOC100181405	ENSCINP00000005637	ENSCINP00000030042	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.976
F7AHK9_CIOIN	LOC100185648	ENSCINP00000005637	ENSCINP00000005607	CoA carboxyltransferase N-terminal domain-containing protein.	Uncharacterized protein.	0.958
H2XSN3_CIOIN	F6YQT3_CIOIN	ENSCINP00000032667	ENSCINP00000007919	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.657
H2XSN3_CIOIN	F7AHK9_CIOIN	ENSCINP00000032667	ENSCINP00000005637	Pyruvate carboxyltransferase domain-containing protein.	CoA carboxyltransferase N-terminal domain-containing protein.	0.786
H2XSN3_CIOIN	LOC100181141	ENSCINP00000032667	ENSCINP00000018880	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.792
H2XSN3_CIOIN	LOC100181405	ENSCINP00000032667	ENSCINP00000030042	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.537
H2XSN3_CIOIN	LOC100185648	ENSCINP00000032667	ENSCINP00000005607	Pyruvate carboxyltransferase domain-containing protein.	Uncharacterized protein.	0.992
LOC100181141	F6YQT3_CIOIN	ENSCINP00000018880	ENSCINP00000007919	Uncharacterized protein.	Uncharacterized protein.	0.995
LOC100181141	F7AHK9_CIOIN	ENSCINP00000018880	ENSCINP00000005637	Uncharacterized protein.	CoA carboxyltransferase N-terminal domain-containing protein.	0.904
LOC100181141	H2XSN3_CIOIN	ENSCINP00000018880	ENSCINP00000032667	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.792
LOC100181141	LOC100181405	ENSCINP00000018880	ENSCINP00000030042	Uncharacterized protein.	Uncharacterized protein.	0.983
LOC100181141	LOC100185648	ENSCINP00000018880	ENSCINP00000005607	Uncharacterized protein.	Uncharacterized protein.	0.958