(10 nodes) Class I peroxisomal membrane protein import network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100181214	ATP-binding cassette sub-family D member 3-like. (658 aa)
	F6Q1G7_CIOIN	AAA domain-containing protein; Belongs to the AAA ATPase family. (283 aa)
	F6VE39_CIOIN	Peroxisomal membrane protein PEX16. (103 aa)
	F6YRI1_CIOIN	Uncharacterized protein. (742 aa)
	LOC100187475	Peroxisomal membrane protein 11C. (220 aa)
	LOC100181886	Peroxisomal membrane protein 4-like. (211 aa)
	LOC100181360	Uncharacterized protein. (641 aa)
	LOC100180565	Peroxisomal membrane protein 11A-like. (219 aa)
	H2XZH5_CIOIN	Uncharacterized protein. (347 aa)
	LOC100185013	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (152 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6Q1G7_CIOIN	F6VE39_CIOIN	ENSCINP00000001368	ENSCINP00000001958	AAA domain-containing protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein PEX16.	0.548
F6Q1G7_CIOIN	F6YRI1_CIOIN	ENSCINP00000001368	ENSCINP00000014767	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.645
F6Q1G7_CIOIN	H2XZH5_CIOIN	ENSCINP00000001368	ENSCINP00000035059	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.739
F6Q1G7_CIOIN	LOC100180565	ENSCINP00000001368	ENSCINP00000033747	AAA domain-containing protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein 11A-like.	0.704
F6Q1G7_CIOIN	LOC100181214	ENSCINP00000001368	ENSCINP00000000355	AAA domain-containing protein; Belongs to the AAA ATPase family.	ATP-binding cassette sub-family D member 3-like.	0.684
F6Q1G7_CIOIN	LOC100181360	ENSCINP00000001368	ENSCINP00000030866	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.538
F6Q1G7_CIOIN	LOC100181886	ENSCINP00000001368	ENSCINP00000028200	AAA domain-containing protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein 4-like.	0.623
F6Q1G7_CIOIN	LOC100185013	ENSCINP00000001368	ENSCINP00000035687	AAA domain-containing protein; Belongs to the AAA ATPase family.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.668
F6Q1G7_CIOIN	LOC100187475	ENSCINP00000001368	ENSCINP00000023519	AAA domain-containing protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein 11C.	0.599
F6VE39_CIOIN	F6Q1G7_CIOIN	ENSCINP00000001958	ENSCINP00000001368	Peroxisomal membrane protein PEX16.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.548
F6VE39_CIOIN	F6YRI1_CIOIN	ENSCINP00000001958	ENSCINP00000014767	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.547
F6VE39_CIOIN	H2XZH5_CIOIN	ENSCINP00000001958	ENSCINP00000035059	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.751
F6VE39_CIOIN	LOC100180565	ENSCINP00000001958	ENSCINP00000033747	Peroxisomal membrane protein PEX16.	Peroxisomal membrane protein 11A-like.	0.702
F6VE39_CIOIN	LOC100181214	ENSCINP00000001958	ENSCINP00000000355	Peroxisomal membrane protein PEX16.	ATP-binding cassette sub-family D member 3-like.	0.649
F6VE39_CIOIN	LOC100181360	ENSCINP00000001958	ENSCINP00000030866	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.515
F6VE39_CIOIN	LOC100181886	ENSCINP00000001958	ENSCINP00000028200	Peroxisomal membrane protein PEX16.	Peroxisomal membrane protein 4-like.	0.487
F6VE39_CIOIN	LOC100185013	ENSCINP00000001958	ENSCINP00000035687	Peroxisomal membrane protein PEX16.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.633
F6VE39_CIOIN	LOC100187475	ENSCINP00000001958	ENSCINP00000023519	Peroxisomal membrane protein PEX16.	Peroxisomal membrane protein 11C.	0.577
F6YRI1_CIOIN	F6Q1G7_CIOIN	ENSCINP00000014767	ENSCINP00000001368	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.645
F6YRI1_CIOIN	F6VE39_CIOIN	ENSCINP00000014767	ENSCINP00000001958	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.547