STRINGSTRING
LOC100184593 LOC100184593 F6SG33_CIOIN F6SG33_CIOIN F7A2Q0_CIOIN F7A2Q0_CIOIN F6ZRC6_CIOIN F6ZRC6_CIOIN F6R2F1_CIOIN F6R2F1_CIOIN LOC100182286 LOC100182286 LOC100176226 LOC100176226 H2XU42_CIOIN H2XU42_CIOIN H2XUY3_CIOIN H2XUY3_CIOIN LOC100177275 LOC100177275
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100184593Sorbitol dehydrogenase. (360 aa)
F6SG33_CIOINUncharacterized protein; Belongs to the FGGY kinase family. (567 aa)
F7A2Q0_CIOINHydrolase_4 domain-containing protein. (150 aa)
F6ZRC6_CIOINAldo_ket_red domain-containing protein. (317 aa)
F6R2F1_CIOINHydrolase_4 domain-containing protein. (149 aa)
LOC100182286Carbonyl reductase [NADPH] 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
LOC100176226Aldose reductase-like. (319 aa)
H2XU42_CIOINUncharacterized protein. (118 aa)
H2XUY3_CIOINAldo_ket_red domain-containing protein. (327 aa)
LOC100177275PKS_ER domain-containing protein. (365 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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