STRINGSTRING
LOC100177554 LOC100177554 F6QJQ8_CIOIN F6QJQ8_CIOIN F6TIR0_CIOIN F6TIR0_CIOIN LOC100176772 LOC100176772 F6T1X5_CIOIN F6T1X5_CIOIN F6PKA8_CIOIN F6PKA8_CIOIN F6PHI9_CIOIN F6PHI9_CIOIN F6WNN3_CIOIN F6WNN3_CIOIN F6UA87_CIOIN F6UA87_CIOIN H2XYW4_CIOIN H2XYW4_CIOIN LOC100184252 LOC100184252
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100177554Oxidoreductase NAD-binding domain-containing protein 1-like isoform X1. (311 aa)
F6QJQ8_CIOINUncharacterized protein. (586 aa)
F6TIR0_CIOINDihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1024 aa)
LOC100176772NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (308 aa)
F6T1X5_CIOINUncharacterized protein. (508 aa)
F6PKA8_CIOINUncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (383 aa)
F6PHI9_CIOINCPSase_sm_chain domain-containing protein. (205 aa)
F6WNN3_CIOINOMPdecase domain-containing protein. (489 aa)
F6UA87_CIOINDihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (392 aa)
H2XYW4_CIOINUncharacterized protein. (128 aa)
LOC100184252Vesicle transport protein GOT1B. (138 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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