(5 nodes) Inositol monophosphatase-like, and Translation release factor complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100179492	FAD synthase. (516 aa)
	LOC100183137	Uncharacterized protein. (306 aa)
	F6X7X8_CIOIN	Tr-type G domain-containing protein. (554 aa)
	asak	ATP sulfurylase/APS kinase isoform X1. (618 aa)
	F7A4P8_CIOIN	Uncharacterized protein. (383 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6X7X8_CIOIN	LOC100179492	ENSCINP00000015370	ENSCINP00000002172	Tr-type G domain-containing protein.	FAD synthase.	0.495
F6X7X8_CIOIN	asak	ENSCINP00000015370	ENSCINP00000018567	Tr-type G domain-containing protein.	ATP sulfurylase/APS kinase isoform X1.	0.904
F7A4P8_CIOIN	LOC100179492	ENSCINP00000022413	ENSCINP00000002172	Uncharacterized protein.	FAD synthase.	0.606
F7A4P8_CIOIN	asak	ENSCINP00000022413	ENSCINP00000018567	Uncharacterized protein.	ATP sulfurylase/APS kinase isoform X1.	0.717
LOC100179492	F6X7X8_CIOIN	ENSCINP00000002172	ENSCINP00000015370	FAD synthase.	Tr-type G domain-containing protein.	0.495
LOC100179492	F7A4P8_CIOIN	ENSCINP00000002172	ENSCINP00000022413	FAD synthase.	Uncharacterized protein.	0.606
LOC100179492	LOC100183137	ENSCINP00000002172	ENSCINP00000007549	FAD synthase.	Uncharacterized protein.	0.606
LOC100179492	asak	ENSCINP00000002172	ENSCINP00000018567	FAD synthase.	ATP sulfurylase/APS kinase isoform X1.	0.998
LOC100183137	LOC100179492	ENSCINP00000007549	ENSCINP00000002172	Uncharacterized protein.	FAD synthase.	0.606
LOC100183137	asak	ENSCINP00000007549	ENSCINP00000018567	Uncharacterized protein.	ATP sulfurylase/APS kinase isoform X1.	0.970
asak	F6X7X8_CIOIN	ENSCINP00000018567	ENSCINP00000015370	ATP sulfurylase/APS kinase isoform X1.	Tr-type G domain-containing protein.	0.904
asak	F7A4P8_CIOIN	ENSCINP00000018567	ENSCINP00000022413	ATP sulfurylase/APS kinase isoform X1.	Uncharacterized protein.	0.717
asak	LOC100179492	ENSCINP00000018567	ENSCINP00000002172	ATP sulfurylase/APS kinase isoform X1.	FAD synthase.	0.998
asak	LOC100183137	ENSCINP00000018567	ENSCINP00000007549	ATP sulfurylase/APS kinase isoform X1.	Uncharacterized protein.	0.970