STRINGSTRING
LOC100182622 LOC100182622 LOC100175647 LOC100175647 LOC100179207 LOC100179207 F6VA08_CIOIN F6VA08_CIOIN F6U637_CIOIN F6U637_CIOIN F6UBX1_CIOIN F6UBX1_CIOIN F6QW56_CIOIN F6QW56_CIOIN F6Z7S0_CIOIN F6Z7S0_CIOIN H2XUQ9_CIOIN H2XUQ9_CIOIN H2XYE1_CIOIN H2XYE1_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100182622Uroporphyrinogen decarboxylase. (362 aa)
LOC100175647Porphobilinogen deaminase. (359 aa)
LOC100179207uroporphyrinogen-III synthase-like. (251 aa)
F6VA08_CIOINProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (469 aa)
F6U637_CIOINUncharacterized protein. (689 aa)
F6UBX1_CIOINVWFA domain-containing protein. (207 aa)
F6QW56_CIOINUncharacterized protein. (1026 aa)
F6Z7S0_CIOINDelta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (334 aa)
H2XUQ9_CIOINVIT domain-containing protein. (207 aa)
H2XYE1_CIOIN5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (637 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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