STRINGSTRING
LOC100176701 LOC100176701 LOC100184399 LOC100184399 F6YRX9_CIOIN F6YRX9_CIOIN F6VL03_CIOIN F6VL03_CIOIN LOC100186020 LOC100186020 LOC100184237 LOC100184237 LOC100176329 LOC100176329 F6PI32_CIOIN F6PI32_CIOIN F6SPL5_CIOIN F6SPL5_CIOIN LOC100175762 LOC100175762 F7AS27_CIOIN F7AS27_CIOIN F7ARZ0_CIOIN F7ARZ0_CIOIN LOC100182900 LOC100182900 H2XMQ5_CIOIN H2XMQ5_CIOIN LOC100185641 LOC100185641 elo elo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100176701Elongation of very long chain fatty acids protein. (272 aa)
LOC100184399Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...] (225 aa)
F6YRX9_CIOINUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (311 aa)
F6VL03_CIOINElongation of very long chain fatty acids protein. (256 aa)
LOC100186020Elongation of very long chain fatty acids protein. (275 aa)
LOC100184237Elongation of very long chain fatty acids protein. (279 aa)
LOC100176329Very-long-chain 3-oxoacyl-CoA reductase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (310 aa)
F6PI32_CIOINUncharacterized protein. (462 aa)
F6SPL5_CIOINElongation of very long chain fatty acids protein. (173 aa)
LOC100175762Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...] (361 aa)
F7AS27_CIOINIMD domain-containing protein. (565 aa)
F7ARZ0_CIOINUncharacterized protein. (223 aa)
LOC100182900Elongation of very long chain fatty acids protein. (290 aa)
H2XMQ5_CIOINElongation of very long chain fatty acids protein. (276 aa)
LOC100185641FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. (297 aa)
eloElongation of very long chain fatty acids protein. (289 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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