STRINGSTRING
LOC100185712 LOC100185712 LOC100177683 LOC100177683 F6VKC0_CIOIN F6VKC0_CIOIN LOC100183715 LOC100183715 F6ZY58_CIOIN F6ZY58_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100185712Uncharacterized protein. (483 aa)
LOC100177683Transmembrane protein 147-like. (225 aa)
F6VKC0_CIOINCalcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. (184 aa)
LOC100183715Protein Asterix. (104 aa)
F6ZY58_CIOINPeptidase_M28 domain-containing protein. (554 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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