STRINGSTRING
F6SEM6_CIOIN F6SEM6_CIOIN LOC100178595 LOC100178595 F6VCN7_CIOIN F6VCN7_CIOIN e(y)2 e(y)2 F6RRI2_CIOIN F6RRI2_CIOIN F6WCC6_CIOIN F6WCC6_CIOIN LOC100180594 LOC100180594 F6ZUE4_CIOIN F6ZUE4_CIOIN F6RG39_CIOIN F6RG39_CIOIN F7B826_CIOIN F7B826_CIOIN H2Y359_CIOIN H2Y359_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6SEM6_CIOINSAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (256 aa)
LOC100178595Transcriptional adapter. (451 aa)
F6VCN7_CIOINN-acetyltransferase domain-containing protein. (709 aa)
e(y)2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (104 aa)
F6RRI2_CIOINUSP domain-containing protein; Belongs to the peptidase C19 family. (386 aa)
F6WCC6_CIOINUncharacterized protein. (423 aa)
LOC100180594Transcriptional adapter 1-like. (307 aa)
F6ZUE4_CIOINUncharacterized protein. (292 aa)
F6RG39_CIOINSGF29 C-terminal domain-containing protein. (293 aa)
F7B826_CIOINUncharacterized protein. (316 aa)
H2Y359_CIOINUncharacterized protein. (365 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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