8 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6WQE3_CIOIN	Uncharacterized protein. (310 aa)
	H2Y233_CIOIN	Nuclear cap-binding protein subunit 2. (185 aa)
	F6ZHD7_CIOIN	WD_REPEATS_REGION domain-containing protein. (1093 aa)
	F6S0L5_CIOIN	Uncharacterized protein. (985 aa)
	H2XXX1_CIOIN	Uncharacterized protein. (161 aa)
	F7B4V3_CIOIN	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (225 aa)
	LOC100187540	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (235 aa)
	LOC101242392	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family. (219 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6S0L5_CIOIN	F7B4V3_CIOIN	ENSCINP00000018851	ENSCINP00000008672	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.956
F6S0L5_CIOIN	LOC100187540	ENSCINP00000018851	ENSCINP00000000571	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.918
F6S0L5_CIOIN	LOC101242392	ENSCINP00000018851	ENSCINP00000004765	Uncharacterized protein.	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	0.900
F6ZHD7_CIOIN	F7B4V3_CIOIN	ENSCINP00000012233	ENSCINP00000008672	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.437
F7B4V3_CIOIN	F6S0L5_CIOIN	ENSCINP00000008672	ENSCINP00000018851	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.956
F7B4V3_CIOIN	F6ZHD7_CIOIN	ENSCINP00000008672	ENSCINP00000012233	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	WD_REPEATS_REGION domain-containing protein.	0.437
F7B4V3_CIOIN	H2Y233_CIOIN	ENSCINP00000008672	ENSCINP00000035968	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.692
F7B4V3_CIOIN	LOC100187540	ENSCINP00000008672	ENSCINP00000000571	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.907
F7B4V3_CIOIN	LOC101242392	ENSCINP00000008672	ENSCINP00000004765	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	0.910
H2Y233_CIOIN	F7B4V3_CIOIN	ENSCINP00000035968	ENSCINP00000008672	Nuclear cap-binding protein subunit 2.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.692
H2Y233_CIOIN	LOC100187540	ENSCINP00000035968	ENSCINP00000000571	Nuclear cap-binding protein subunit 2.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.490
LOC100187540	F6S0L5_CIOIN	ENSCINP00000000571	ENSCINP00000018851	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.918
LOC100187540	F7B4V3_CIOIN	ENSCINP00000000571	ENSCINP00000008672	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.907
LOC100187540	H2Y233_CIOIN	ENSCINP00000000571	ENSCINP00000035968	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.490
LOC100187540	LOC101242392	ENSCINP00000000571	ENSCINP00000004765	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	0.914
LOC101242392	F6S0L5_CIOIN	ENSCINP00000004765	ENSCINP00000018851	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.900
LOC101242392	F7B4V3_CIOIN	ENSCINP00000004765	ENSCINP00000008672	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.910
LOC101242392	LOC100187540	ENSCINP00000004765	ENSCINP00000000571	Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.914