(18 nodes) Prostaglandin biosynthetic process network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6YVX3_CIOIN	PLA2c domain-containing protein. (232 aa)
	F6YVW0_CIOIN	PLA2c domain-containing protein. (239 aa)
	F6VQ32_CIOIN	Uncharacterized protein; Belongs to the GST superfamily. (198 aa)
	LOC100184120	CS domain-containing protein. (193 aa)
	F7AHA3_CIOIN	Phospholipase A2. (758 aa)
	F6WCD3_CIOIN	PNPLA domain-containing protein. (625 aa)
	F7AAV2_CIOIN	EGF-like domain-containing protein. (618 aa)
	LOC100177239	Hematopoietic prostaglandin D synthase; Belongs to the GST superfamily. (197 aa)
	F6PWH2_CIOIN	Uncharacterized protein. (201 aa)
	F6Y0W6_CIOIN	Uncharacterized protein. (227 aa)
	F6Y0W0_CIOIN	PLA2c domain-containing protein. (234 aa)
	LOC100186966	Uncharacterized protein. (202 aa)
	H2XRR3_CIOIN	Phospholipase A2. (730 aa)
	LOC100184425	Glutathione S-transferase 1-like. (199 aa)
	LOC100182061	Uncharacterized protein; Belongs to the GST superfamily. (202 aa)
	LOC100175706	Glutaredoxin domain-containing protein. (285 aa)
	F7BDX5_CIOIN	Uncharacterized protein; Belongs to the GST superfamily. (204 aa)
	F6SDP7_CIOIN	EGF-like domain-containing protein. (628 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PWH2_CIOIN	F6SDP7_CIOIN	ENSCINP00000025320	ENSCINP00000012732	Uncharacterized protein.	EGF-like domain-containing protein.	0.909
F6PWH2_CIOIN	F6VQ32_CIOIN	ENSCINP00000025320	ENSCINP00000012909	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.902
F6PWH2_CIOIN	F7AAV2_CIOIN	ENSCINP00000025320	ENSCINP00000023392	Uncharacterized protein.	EGF-like domain-containing protein.	0.909
F6PWH2_CIOIN	F7BDX5_CIOIN	ENSCINP00000025320	ENSCINP00000009038	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.902
F6PWH2_CIOIN	LOC100175706	ENSCINP00000025320	ENSCINP00000001257	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.900
F6PWH2_CIOIN	LOC100177239	ENSCINP00000025320	ENSCINP00000025179	Uncharacterized protein.	Hematopoietic prostaglandin D synthase; Belongs to the GST superfamily.	0.902
F6PWH2_CIOIN	LOC100182061	ENSCINP00000025320	ENSCINP00000001243	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.902
F6PWH2_CIOIN	LOC100184425	ENSCINP00000025320	ENSCINP00000000153	Uncharacterized protein.	Glutathione S-transferase 1-like.	0.902
F6PWH2_CIOIN	LOC100186966	ENSCINP00000025320	ENSCINP00000027377	Uncharacterized protein.	Uncharacterized protein.	0.902
F6SDP7_CIOIN	F6PWH2_CIOIN	ENSCINP00000012732	ENSCINP00000025320	EGF-like domain-containing protein.	Uncharacterized protein.	0.909
F6SDP7_CIOIN	F6VQ32_CIOIN	ENSCINP00000012732	ENSCINP00000012909	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.905
F6SDP7_CIOIN	F6Y0W6_CIOIN	ENSCINP00000012732	ENSCINP00000025814	EGF-like domain-containing protein.	Uncharacterized protein.	0.793
F6SDP7_CIOIN	F6YVW0_CIOIN	ENSCINP00000012732	ENSCINP00000012832	EGF-like domain-containing protein.	PLA2c domain-containing protein.	0.688
F6SDP7_CIOIN	F6YVX3_CIOIN	ENSCINP00000012732	ENSCINP00000012830	EGF-like domain-containing protein.	PLA2c domain-containing protein.	0.440
F6SDP7_CIOIN	F7AAV2_CIOIN	ENSCINP00000012732	ENSCINP00000023392	EGF-like domain-containing protein.	EGF-like domain-containing protein.	0.902
F6SDP7_CIOIN	F7BDX5_CIOIN	ENSCINP00000012732	ENSCINP00000009038	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.906
F6SDP7_CIOIN	LOC100175706	ENSCINP00000012732	ENSCINP00000001257	EGF-like domain-containing protein.	Glutaredoxin domain-containing protein.	0.916
F6SDP7_CIOIN	LOC100177239	ENSCINP00000012732	ENSCINP00000025179	EGF-like domain-containing protein.	Hematopoietic prostaglandin D synthase; Belongs to the GST superfamily.	0.905
F6SDP7_CIOIN	LOC100182061	ENSCINP00000012732	ENSCINP00000001243	EGF-like domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.905
F6SDP7_CIOIN	LOC100184425	ENSCINP00000012732	ENSCINP00000000153	EGF-like domain-containing protein.	Glutathione S-transferase 1-like.	0.905