STRINGSTRING
tardbp tardbp Zf(ubp)-4 Zf(ubp)-4 F6SGH3_CIOIN F6SGH3_CIOIN LOC100184027 LOC100184027 F7BL59_CIOIN F7BL59_CIOIN LOC100176230 LOC100176230 F6V136_CIOIN F6V136_CIOIN F6Q792_CIOIN F6Q792_CIOIN F6Q587_CIOIN F6Q587_CIOIN F6Q4Z2_CIOIN F6Q4Z2_CIOIN F6PH84_CIOIN F6PH84_CIOIN LOC100182715 LOC100182715 LOC100175699 LOC100175699 LOC100179568 LOC100179568 F7AEP7_CIOIN F7AEP7_CIOIN F6WWK0_CIOIN F6WWK0_CIOIN LOC100176481 LOC100176481 F6W8K8_CIOIN F6W8K8_CIOIN LOC100178056 LOC100178056 LOC100182616 LOC100182616 LOC100176240 LOC100176240 LOC100177488 LOC100177488 LOC100181643 LOC100181643 LOC100180093 LOC100180093 LOC100182908 LOC100182908 F6XU26_CIOIN F6XU26_CIOIN F6XTZ0_CIOIN F6XTZ0_CIOIN F6WTH1_CIOIN F6WTH1_CIOIN F6WTG3_CIOIN F6WTG3_CIOIN F6WTB4_CIOIN F6WTB4_CIOIN LOC100186483 LOC100186483 LOC100185308 LOC100185308 F6TEH9_CIOIN F6TEH9_CIOIN F6SSP8_CIOIN F6SSP8_CIOIN LOC100177970 LOC100177970 F6UFC1_CIOIN F6UFC1_CIOIN LOC100178501 LOC100178501 H2XJF1_CIOIN H2XJF1_CIOIN LOC100182475 LOC100182475 F6YDG7_CIOIN F6YDG7_CIOIN LOC104265809 LOC104265809 F6X134_CIOIN F6X134_CIOIN LOC100184300 LOC100184300 LOC100181928 LOC100181928 LOC100184779 LOC100184779 LOC100184392 LOC100184392 F6XM64_CIOIN F6XM64_CIOIN F6WZT7_CIOIN F6WZT7_CIOIN ENSCINP00000005756 ENSCINP00000005756 F6WZS2_CIOIN F6WZS2_CIOIN F6TMY9_CIOIN F6TMY9_CIOIN F6QBK7_CIOIN F6QBK7_CIOIN LOC113474384 LOC113474384 F6ZP18_CIOIN F6ZP18_CIOIN F6ZP02_CIOIN F6ZP02_CIOIN F6Z541_CIOIN F6Z541_CIOIN LOC100187342 LOC100187342 F6TBF9_CIOIN F6TBF9_CIOIN zf(matrin)-2 zf(matrin)-2 zf(c2h2)-55 zf(c2h2)-55 F7A771_CIOIN F7A771_CIOIN F6ZML6_CIOIN F6ZML6_CIOIN LOC100175452 LOC100175452 F6UA38_CIOIN F6UA38_CIOIN F7BHR3_CIOIN F7BHR3_CIOIN zf(c3h)-9 zf(c3h)-9 F6XJG1_CIOIN F6XJG1_CIOIN F6UYA6_CIOIN F6UYA6_CIOIN LOC100180777 LOC100180777 F6U6C0_CIOIN F6U6C0_CIOIN F6TIY7_CIOIN F6TIY7_CIOIN LOC100183747 LOC100183747 LOC100187539 LOC100187539 F6Z8S6_CIOIN F6Z8S6_CIOIN LOC100183358 LOC100183358 LOC100183982 LOC100183982 F6Z145_CIOIN F6Z145_CIOIN Ci-ZF(C3H)-16 Ci-ZF(C3H)-16 LOC100185263 LOC100185263 F6UHH9_CIOIN F6UHH9_CIOIN F7BP62_CIOIN F7BP62_CIOIN F7AM07_CIOIN F7AM07_CIOIN F6YGM8_CIOIN F6YGM8_CIOIN LOC100187321 LOC100187321 F6ZQQ7_CIOIN F6ZQQ7_CIOIN F6WQE3_CIOIN F6WQE3_CIOIN F6PRY2_CIOIN F6PRY2_CIOIN F6PM95_CIOIN F6PM95_CIOIN F6TYS5_CIOIN F6TYS5_CIOIN LOC100185146 LOC100185146 F7A631_CIOIN F7A631_CIOIN LOC100185978 LOC100185978 F6X8P5_CIOIN F6X8P5_CIOIN LOC100176960 LOC100176960 LOC100185078 LOC100185078 LOC100182155 LOC100182155 F6UIA2_CIOIN F6UIA2_CIOIN F7BFG7_CIOIN F7BFG7_CIOIN LOC100177468 LOC100177468 Zf(cchc)-13 Zf(cchc)-13 F6TFJ1_CIOIN F6TFJ1_CIOIN F6Y1N2_CIOIN F6Y1N2_CIOIN Ci-zf(cchc)-1 Ci-zf(cchc)-1 LOC100183726 LOC100183726 zf(c3h)-12 zf(c3h)-12 LOC778641 LOC778641 F6ZHD7_CIOIN F6ZHD7_CIOIN LOC100178141 LOC100178141 F7B1Z2_CIOIN F7B1Z2_CIOIN Zf(u1like)-1 Zf(u1like)-1 F6RKQ2_CIOIN F6RKQ2_CIOIN LOC100177545 LOC100177545 LOC100183839 LOC100183839 LOC100187100 LOC100187100 F6QVH1_CIOIN F6QVH1_CIOIN LOC100184101 LOC100184101 F7A7C3_CIOIN F7A7C3_CIOIN F6XBC5_CIOIN F6XBC5_CIOIN LOC100178584 LOC100178584 F6ZD00_CIOIN F6ZD00_CIOIN F6YAA4_CIOIN F6YAA4_CIOIN F6WAZ5_CIOIN F6WAZ5_CIOIN F6SBF1_CIOIN F6SBF1_CIOIN F6ZBX8_CIOIN F6ZBX8_CIOIN LOC100186678 LOC100186678 LOC100176171 LOC100176171 F6Y7T8_CIOIN F6Y7T8_CIOIN F6W785_CIOIN F6W785_CIOIN LOC100184413 LOC100184413 F6YK62_CIOIN F6YK62_CIOIN F6YK49_CIOIN F6YK49_CIOIN F6YK36_CIOIN F6YK36_CIOIN F6VCT2_CIOIN F6VCT2_CIOIN LOC100176319 LOC100176319 F6UKV2_CIOIN F6UKV2_CIOIN LOC100180520 LOC100180520 LOC100180213 LOC100180213 F6ZJP7_CIOIN F6ZJP7_CIOIN F6T7M7_CIOIN F6T7M7_CIOIN F6X3C5_CIOIN F6X3C5_CIOIN F6X3A4_CIOIN F6X3A4_CIOIN F6XF93_CIOIN F6XF93_CIOIN LOC113474389 LOC113474389 F7AAE8_CIOIN F7AAE8_CIOIN F7AAC1_CIOIN F7AAC1_CIOIN F6W453_CIOIN F6W453_CIOIN F6Z6N2_CIOIN F6Z6N2_CIOIN LOC100186564 LOC100186564 LOC100181071 LOC100181071 zf(cchc)-20 zf(cchc)-20 F6R4T5_CIOIN F6R4T5_CIOIN LOC494392 LOC494392 LOC100183284 LOC100183284 F6UF46_CIOIN F6UF46_CIOIN F7AI93_CIOIN F7AI93_CIOIN zf(cchc)-12 zf(cchc)-12 F6TQ55_CIOIN F6TQ55_CIOIN stip stip LOC104265829 LOC104265829 LOC100180966 LOC100180966 LOC100176856 LOC100176856 F6R2U8_CIOIN F6R2U8_CIOIN F6PKJ4_CIOIN F6PKJ4_CIOIN F6R6C4_CIOIN F6R6C4_CIOIN F6QE47_CIOIN F6QE47_CIOIN LOC494419 LOC494419 LOC100183682 LOC100183682 F6S0J6_CIOIN F6S0J6_CIOIN F7A5V7_CIOIN F7A5V7_CIOIN F6ZM80_CIOIN F6ZM80_CIOIN LOC100175824 LOC100175824 F6TLE4_CIOIN F6TLE4_CIOIN F6Y8Y8_CIOIN F6Y8Y8_CIOIN F7ACY4_CIOIN F7ACY4_CIOIN F6W8G0_CIOIN F6W8G0_CIOIN F6ZTJ9_CIOIN F6ZTJ9_CIOIN F6Y5G8_CIOIN F6Y5G8_CIOIN F6R6M9_CIOIN F6R6M9_CIOIN zf(c3h)-5 zf(c3h)-5 F6TJB5_CIOIN F6TJB5_CIOIN F6XIG6_CIOIN F6XIG6_CIOIN F6X986_CIOIN F6X986_CIOIN LOC100181701 LOC100181701 cir cir F6U5S2_CIOIN F6U5S2_CIOIN LOC100184230 LOC100184230 LOC100181343 LOC100181343 F7ATM0_CIOIN F7ATM0_CIOIN LOC100183193 LOC100183193 F6ZR14_CIOIN F6ZR14_CIOIN zf(c2h2)-86 zf(c2h2)-86 F6XCS0_CIOIN F6XCS0_CIOIN LOC100177537 LOC100177537 F7BMW8_CIOIN F7BMW8_CIOIN LOC100184512 LOC100184512 LOC100182504 LOC100182504 F6V3E7_CIOIN F6V3E7_CIOIN LSM1 LSM1 F6YVJ9_CIOIN F6YVJ9_CIOIN F6YBL5_CIOIN F6YBL5_CIOIN F6TNN9_CIOIN F6TNN9_CIOIN Zf(c3h)-11 Zf(c3h)-11 F6QGB1_CIOIN F6QGB1_CIOIN LOC100185985 LOC100185985 F6RQ60_CIOIN F6RQ60_CIOIN F6RIG9_CIOIN F6RIG9_CIOIN F6QW82_CIOIN F6QW82_CIOIN F6YB82_CIOIN F6YB82_CIOIN F6YB67_CIOIN F6YB67_CIOIN F6YAV6_CIOIN F6YAV6_CIOIN F6SY99_CIOIN F6SY99_CIOIN F6YRL7_CIOIN F6YRL7_CIOIN F7B819_CIOIN F7B819_CIOIN F6Z0E6_CIOIN F6Z0E6_CIOIN F6WHY6_CIOIN F6WHY6_CIOIN LOC100178781 LOC100178781 F6W3V6_CIOIN F6W3V6_CIOIN LOC100186946 LOC100186946 F7AIB9_CIOIN F7AIB9_CIOIN F7A0C5_CIOIN F7A0C5_CIOIN LOC100180259 LOC100180259 F6SEU1_CIOIN F6SEU1_CIOIN H2XJI3_CIOIN H2XJI3_CIOIN H2XJJ8_CIOIN H2XJJ8_CIOIN H2XJK0_CIOIN H2XJK0_CIOIN H2XJM4_CIOIN H2XJM4_CIOIN LOC100180754 LOC100180754 H2XK36_CIOIN H2XK36_CIOIN LOC100179671 LOC100179671 LOC100183985 LOC100183985 H2XKA1_CIOIN H2XKA1_CIOIN H2XKA7_CIOIN H2XKA7_CIOIN H2XKE7_CIOIN H2XKE7_CIOIN H2XKP3_CIOIN H2XKP3_CIOIN H2XKX7_CIOIN H2XKX7_CIOIN LOC100182395 LOC100182395 Zf(c3h)-13 Zf(c3h)-13 H2XNI6_CIOIN H2XNI6_CIOIN H2XNJ5_CIOIN H2XNJ5_CIOIN H2XNR5_CIOIN H2XNR5_CIOIN H2XNV9_CIOIN H2XNV9_CIOIN H2XP13_CIOIN H2XP13_CIOIN H2XP93_CIOIN H2XP93_CIOIN H2XPK9_CIOIN H2XPK9_CIOIN H2XPP0_CIOIN H2XPP0_CIOIN dazap2-like dazap2-like LOC100187414 LOC100187414 H2XQH7_CIOIN H2XQH7_CIOIN zf(rbz) zf(rbz) H2XR28_CIOIN H2XR28_CIOIN H2XRH2_CIOIN H2XRH2_CIOIN LOC100181225 LOC100181225 LOC100180841 LOC100180841 H2XSM0_CIOIN H2XSM0_CIOIN H2XSZ1_CIOIN H2XSZ1_CIOIN LOC100178572 LOC100178572 LOC100186689 LOC100186689 LOC100178674 LOC100178674 H2XUQ0_CIOIN H2XUQ0_CIOIN H2XUS5_CIOIN H2XUS5_CIOIN H2XUU5_CIOIN H2XUU5_CIOIN H2XUZ2_CIOIN H2XUZ2_CIOIN H2XVD0_CIOIN H2XVD0_CIOIN LOC100181195 LOC100181195 H2XVU7_CIOIN H2XVU7_CIOIN H2XW02_CIOIN H2XW02_CIOIN LOC104266883 LOC104266883 H2XWH5_CIOIN H2XWH5_CIOIN H2XWK5_CIOIN H2XWK5_CIOIN H2XXX1_CIOIN H2XXX1_CIOIN LOC100184713 LOC100184713 H2XY34_CIOIN H2XY34_CIOIN LOC100180305 LOC100180305 H2XZ51_CIOIN H2XZ51_CIOIN LOC100186379 LOC100186379 H2XZG0_CIOIN H2XZG0_CIOIN H2XZL8_CIOIN H2XZL8_CIOIN H2Y010_CIOIN H2Y010_CIOIN LOC100180713 LOC100180713 H2Y0N2_CIOIN H2Y0N2_CIOIN LOC100185829 LOC100185829 LOC113474017 LOC113474017 H2Y1I9_CIOIN H2Y1I9_CIOIN H2Y1M0_CIOIN H2Y1M0_CIOIN RU1C_CIOIN RU1C_CIOIN zf(cchc)-24 zf(cchc)-24 H2Y233_CIOIN H2Y233_CIOIN H2Y2H8_CIOIN H2Y2H8_CIOIN H2Y2K8_CIOIN H2Y2K8_CIOIN LOC100182620 LOC100182620 H2Y3Q2_CIOIN H2Y3Q2_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tardbpCi-Tardbp protein. (440 aa)
Zf(ubp)-4Uncharacterized protein. (218 aa)
F6SGH3_CIOINRRM domain-containing protein. (167 aa)
LOC100184027mRNA cap guanine-N7 methyltransferase. (398 aa)
F7BL59_CIOINExonuclease domain-containing protein. (241 aa)
LOC100176230WD_REPEATS_REGION domain-containing protein. (328 aa)
F6V136_CIOINCPSF_A domain-containing protein. (1354 aa)
F6Q792_CIOINtRNA_int_endo domain-containing protein. (140 aa)
F6Q587_CIOINUncharacterized protein. (86 aa)
F6Q4Z2_CIOINUncharacterized protein. (276 aa)
F6PH84_CIOINUncharacterized protein. (468 aa)
LOC100182715Serine/threonine-protein kinase PRP4 homolog. (594 aa)
LOC100175699Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (602 aa)
LOC100179568LRRcap domain-containing protein. (200 aa)
F7AEP7_CIOINRRM domain-containing protein. (158 aa)
F6WWK0_CIOINWD_REPEATS_REGION domain-containing protein. (508 aa)
LOC100176481U1-type domain-containing protein. (108 aa)
F6W8K8_CIOINUncharacterized protein. (740 aa)
LOC100178056Splicing factor 3B subunit 3 isoform X1. (1216 aa)
LOC100182616Nuclear inhibitor of protein phosphatase 1-like. (324 aa)
LOC100176240N6-adenosine-methyltransferase non-catalytic subunit-like; Belongs to the MT-A70-like family. (474 aa)
LOC100177488Protein BUD31 homolog. (144 aa)
LOC100181643poly(A) RNA polymerase gld-2 isoform X1. (713 aa)
LOC100180093WD40 repeat-containing protein SMU1. (513 aa)
LOC100182908Uncharacterized protein; Belongs to the DEAD box helicase family. (779 aa)
F6XU26_CIOINZinc finger protein Ci-ZF(C3H/U1like)-1 isoform X2. (162 aa)
F6XTZ0_CIOINRRM domain-containing protein. (405 aa)
F6WTH1_CIOINRRM domain-containing protein. (180 aa)
F6WTG3_CIOINUncharacterized protein. (473 aa)
F6WTB4_CIOINUncharacterized protein. (199 aa)
LOC100186483Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (449 aa)
LOC100185308Sm domain-containing protein. (173 aa)
F6TEH9_CIOINRRM domain-containing protein. (147 aa)
F6SSP8_CIOINUncharacterized protein. (609 aa)
LOC100177970Splicing factor 3B subunit 4-like. (375 aa)
F6UFC1_CIOINUncharacterized protein. (482 aa)
LOC100178501Uncharacterized protein. (211 aa)
H2XJF1_CIOINSF3b1 domain-containing protein. (898 aa)
LOC100182475Uncharacterized protein. (764 aa)
F6YDG7_CIOINUncharacterized protein. (697 aa)
LOC104265809Polyglutamine-binding protein 1-like. (208 aa)
F6X134_CIOINUncharacterized protein. (427 aa)
LOC100184300Uncharacterized protein. (147 aa)
LOC100181928Uncharacterized protein. (686 aa)
LOC100184779Matrin-type domain-containing protein. (502 aa)
LOC100184392CWF19-like protein 1 isoform X1. (540 aa)
F6XM64_CIOINNOSIC domain-containing protein. (220 aa)
F6WZT7_CIOINPrp31_C domain-containing protein. (96 aa)
ENSCINP00000005756annotation not available (96 aa)
F6WZS2_CIOINProtein kinase domain-containing protein. (1124 aa)
F6TMY9_CIOINUncharacterized protein. (401 aa)
F6QBK7_CIOINUncharacterized protein. (240 aa)
LOC113474384Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (245 aa)
F6ZP18_CIOINUncharacterized protein. (1328 aa)
F6ZP02_CIOINUncharacterized protein. (323 aa)
F6Z541_CIOINRRM domain-containing protein. (486 aa)
LOC100187342WD_REPEATS_REGION domain-containing protein. (330 aa)
F6TBF9_CIOINUncharacterized protein. (407 aa)
zf(matrin)-2Zinc finger protein. (349 aa)
zf(c2h2)-55Zinc finger protein 55. (858 aa)
F7A771_CIOINPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
F6ZML6_CIOINWD_REPEATS_REGION domain-containing protein. (135 aa)
LOC100175452U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (482 aa)
F6UA38_CIOINFip1 domain-containing protein. (511 aa)
F7BHR3_CIOINUncharacterized protein. (857 aa)
zf(c3h)-9Uncharacterized protein. (880 aa)
F6XJG1_CIOINUncharacterized protein. (325 aa)
F6UYA6_CIOINUncharacterized protein. (1131 aa)
LOC100180777serine/Arginine-related protein 53-like. (274 aa)
F6U6C0_CIOINPseudoU_synth_2 domain-containing protein. (339 aa)
F6TIY7_CIOINUncharacterized protein. (479 aa)
LOC100183747Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (430 aa)
LOC100187539TFIIS N-terminal domain-containing protein. (658 aa)
F6Z8S6_CIOINUncharacterized protein. (438 aa)
LOC100183358WD_REPEATS_REGION domain-containing protein. (435 aa)
LOC100183982dnaJ homolog subfamily C member 8. (247 aa)
F6Z145_CIOINUncharacterized protein. (324 aa)
Ci-ZF(C3H)-16Zinc finger protein. (218 aa)
LOC100185263CHHC U11-48K-type domain-containing protein. (318 aa)
F6UHH9_CIOINUncharacterized protein; Belongs to the DEAD box helicase family. (572 aa)
F7BP62_CIOINUncharacterized protein. (767 aa)
F7AM07_CIOINRRM domain-containing protein. (166 aa)
F6YGM8_CIOINUncharacterized protein. (547 aa)
LOC100187321RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (192 aa)
F6ZQQ7_CIOING-patch domain-containing protein. (191 aa)
F6WQE3_CIOINUncharacterized protein. (310 aa)
F6PRY2_CIOINUncharacterized protein. (655 aa)
F6PM95_CIOINWD_REPEATS_REGION domain-containing protein. (322 aa)
F6TYS5_CIOINPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (159 aa)
LOC100185146RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (164 aa)
F7A631_CIOINUncharacterized protein. (221 aa)
LOC100185978Serine/arginine-rich splicing factor 5 isoform X1. (292 aa)
F6X8P5_CIOINGCFC domain-containing protein. (577 aa)
LOC100176960Uncharacterized protein. (2140 aa)
LOC100185078CLK4-associating serine/arginine rich protein isoform X3. (380 aa)
LOC100182155Uncharacterized protein. (427 aa)
F6UIA2_CIOINProtein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). (696 aa)
F7BFG7_CIOINGYF domain-containing protein. (352 aa)
LOC100177468UPF0692 protein C19orf54 homolog. (286 aa)
Zf(cchc)-13CCHC-type domain-containing protein. (494 aa)
F6TFJ1_CIOINUncharacterized protein. (527 aa)
F6Y1N2_CIOINPSP domain-containing protein. (626 aa)
Ci-zf(cchc)-1CCHC-type domain-containing protein. (149 aa)
LOC100183726J domain-containing protein. (266 aa)
zf(c3h)-12Uncharacterized protein. (413 aa)
LOC778641Ci-HTATSF1 protein. (494 aa)
F6ZHD7_CIOINWD_REPEATS_REGION domain-containing protein. (1093 aa)
LOC100178141U1 small nuclear ribonucleoprotein 70 kDa-like. (461 aa)
F7B1Z2_CIOINUncharacterized protein. (355 aa)
Zf(u1like)-1U1-type domain-containing protein. (223 aa)
F6RKQ2_CIOINUncharacterized protein. (437 aa)
LOC100177545Suf domain-containing protein. (724 aa)
LOC100183839U5 small nuclear ribonucleoprotein 40 kDa protein. (351 aa)
LOC100187100Lysine-specific histone demethylase 1A. (705 aa)
F6QVH1_CIOINUncharacterized protein. (545 aa)
LOC100184101Uncharacterized protein. (488 aa)
F7A7C3_CIOINWD_REPEATS_REGION domain-containing protein. (753 aa)
F6XBC5_CIOINProtein kinase domain-containing protein. (656 aa)
LOC100178584Uncharacterized protein. (990 aa)
F6ZD00_CIOINUncharacterized protein. (384 aa)
F6YAA4_CIOINEndo/exonuclease/phosphatase domain-containing protein. (548 aa)
F6WAZ5_CIOINUncharacterized protein. (621 aa)
F6SBF1_CIOINUncharacterized protein. (852 aa)
F6ZBX8_CIOINUncharacterized protein. (405 aa)
LOC100186678Serine/arginine repetitive matrix protein 1-like isoform X2. (1124 aa)
LOC100176171Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A. (389 aa)
F6Y7T8_CIOINUncharacterized protein. (283 aa)
F6W785_CIOINUncharacterized protein. (695 aa)
LOC100184413TRUD domain-containing protein. (423 aa)
F6YK62_CIOINCID domain-containing protein. (222 aa)
F6YK49_CIOINUncharacterized protein. (175 aa)
F6YK36_CIOINUncharacterized protein. (563 aa)
F6VCT2_CIOINUncharacterized protein. (1190 aa)
LOC100176319Serine/arginine-rich splicing factor 1B isoform X2. (235 aa)
F6UKV2_CIOINUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (771 aa)
LOC100180520Uncharacterized protein. (348 aa)
LOC100180213Leucine-rich repeat-containing protein 51-like. (200 aa)
F6ZJP7_CIOINPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
F6T7M7_CIOINUncharacterized protein. (492 aa)
F6X3C5_CIOINHA2 domain-containing protein. (413 aa)
F6X3A4_CIOINUncharacterized protein. (594 aa)
F6XF93_CIOINUncharacterized protein. (410 aa)
LOC113474389Cleavage and polyadenylation specificity factor subunit 2. (784 aa)
F7AAE8_CIOINRRM domain-containing protein. (737 aa)
F7AAC1_CIOINMFAP1 domain-containing protein. (478 aa)
F6W453_CIOINUncharacterized protein. (779 aa)
F6Z6N2_CIOINTudor domain-containing protein. (236 aa)
LOC100186564Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (627 aa)
LOC100181071TRUD domain-containing protein. (596 aa)
zf(cchc)-20Zinc finger protein. (627 aa)
F6R4T5_CIOINUncharacterized protein. (815 aa)
LOC494392Uncharacterized protein LOC494392. (131 aa)
LOC100183284SKIP_SNW domain-containing protein. (534 aa)
F6UF46_CIOINUncharacterized protein. (494 aa)
F7AI93_CIOINUncharacterized protein. (784 aa)
zf(cchc)-12Zinc finger protein (CCHC)-12. (568 aa)
F6TQ55_CIOINDUF2040 domain-containing protein. (415 aa)
stipSip1/TFIP11 interacting protein. (832 aa)
LOC104265829DEAD-box ATP-dependent RNA helicase 20-like; Belongs to the DEAD box helicase family. (573 aa)
LOC100180966RNA-binding protein 4. (336 aa)
LOC100176856Uncharacterized protein. (956 aa)
F6R2U8_CIOINMI domain-containing protein. (776 aa)
F6PKJ4_CIOINMIF4G domain-containing protein. (795 aa)
F6R6C4_CIOINUncharacterized protein. (802 aa)
F6QE47_CIOINUncharacterized protein. (433 aa)
LOC494419Zinc finger protein 183. (325 aa)
LOC100183682Uncharacterized protein. (834 aa)
F6S0J6_CIOINUncharacterized protein. (179 aa)
F7A5V7_CIOINWD_REPEATS_REGION domain-containing protein. (501 aa)
F6ZM80_CIOINUncharacterized protein. (382 aa)
LOC100175824116 kDa U5 small nuclear ribonucleoprotein component. (973 aa)
F6TLE4_CIOINPseudoU_synth_1 domain-containing protein. (371 aa)
F6Y8Y8_CIOINUncharacterized protein. (213 aa)
F7ACY4_CIOINUncharacterized protein. (294 aa)
F6W8G0_CIOINWD_REPEATS_REGION domain-containing protein. (504 aa)
F6ZTJ9_CIOINUncharacterized protein. (896 aa)
F6Y5G8_CIOINUncharacterized protein. (198 aa)
F6R6M9_CIOINUncharacterized protein. (462 aa)
zf(c3h)-5tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (609 aa)
F6TJB5_CIOINDBR1 domain-containing protein. (435 aa)
F6XIG6_CIOINRPOL4c domain-containing protein. (133 aa)
F6X986_CIOINRRM domain-containing protein. (149 aa)
LOC100181701Gem-associated protein 2. (323 aa)
cirCi-CIR protein. (242 aa)
F6U5S2_CIOINKH domain-containing protein. (162 aa)
LOC100184230G-patch domain-containing protein. (805 aa)
LOC100181343RRM domain-containing protein. (127 aa)
F7ATM0_CIOINUncharacterized protein. (240 aa)
LOC100183193Non-canonical poly(A) RNA polymerase PAPD5. (391 aa)
F6ZR14_CIOINUncharacterized protein. (118 aa)
zf(c2h2)-86Spliceosome-associated protein CWC15 homolog. (217 aa)
F6XCS0_CIOINUncharacterized protein. (237 aa)
LOC100177537Protein kinase domain-containing protein. (1105 aa)
F7BMW8_CIOINAdrift-type SAM-dependent 2'-O-MTase domain-containing protein. (260 aa)
LOC100184512U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (127 aa)
LOC100182504Uncharacterized protein. (227 aa)
F6V3E7_CIOINProtein kinase domain-containing protein. (332 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (132 aa)
F6YVJ9_CIOINVIR_N domain-containing protein. (202 aa)
F6YBL5_CIOINRRM domain-containing protein. (260 aa)
F6TNN9_CIOINUncharacterized protein. (376 aa)
Zf(c3h)-11Uncharacterized protein. (409 aa)
F6QGB1_CIOINUncharacterized protein. (363 aa)
LOC100185985RNA binding protein fox-1 homolog 3 isoform X8. (448 aa)
F6RQ60_CIOINSURP motif domain-containing protein. (228 aa)
F6RIG9_CIOINUncharacterized protein. (716 aa)
F6QW82_CIOINUncharacterized protein. (184 aa)
F6YB82_CIOINUncharacterized protein. (251 aa)
F6YB67_CIOINUncharacterized protein. (279 aa)
F6YAV6_CIOINTudor domain-containing protein. (248 aa)
F6SY99_CIOINUncharacterized protein. (329 aa)
F6YRL7_CIOINUncharacterized protein. (199 aa)
F7B819_CIOINUncharacterized protein. (210 aa)
F6Z0E6_CIOINKH domain-containing protein. (136 aa)
F6WHY6_CIOINUncharacterized protein. (223 aa)
LOC100178781Small nuclear ribonucleoprotein-associated protein B-like. (167 aa)
F6W3V6_CIOINRRM domain-containing protein. (196 aa)
LOC100186946Uncharacterized protein. (476 aa)
F7AIB9_CIOINUncharacterized protein. (271 aa)
F7A0C5_CIOINCoilin_N domain-containing protein. (512 aa)
LOC100180259U2 small nuclear ribonucleoprotein A'-like. (252 aa)
F6SEU1_CIOINPan3_PK domain-containing protein. (387 aa)
H2XJI3_CIOINFHA domain-containing protein. (70 aa)
H2XJJ8_CIOINRRM domain-containing protein. (229 aa)
H2XJK0_CIOINPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (536 aa)
H2XJM4_CIOING-patch domain-containing protein. (340 aa)
LOC100180754WD repeat-containing protein 25. (274 aa)
H2XK36_CIOINPWWP domain-containing protein. (443 aa)
LOC100179671Gem-associated protein 7-like. (86 aa)
LOC100183985pre-mRNA-splicing factor 18-like. (348 aa)
H2XKA1_CIOINSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)
H2XKA7_CIOINUncharacterized protein. (142 aa)
H2XKE7_CIOINSLBP_RNA_bind domain-containing protein. (132 aa)
H2XKP3_CIOINA to I editase domain-containing protein. (177 aa)
H2XKX7_CIOINCID domain-containing protein. (235 aa)
LOC100182395U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
Zf(c3h)-13Uncharacterized protein. (477 aa)
H2XNI6_CIOINUncharacterized protein. (477 aa)
H2XNJ5_CIOINUncharacterized protein. (482 aa)
H2XNR5_CIOINUncharacterized protein. (112 aa)
H2XNV9_CIOINPCI domain-containing protein. (194 aa)
H2XP13_CIOINUncharacterized protein. (549 aa)
H2XP93_CIOINUncharacterized protein. (379 aa)
H2XPK9_CIOINUncharacterized protein. (243 aa)
H2XPP0_CIOINDRBM domain-containing protein. (194 aa)
dazap2-likeDAZ associated protein 2-like. (171 aa)
LOC100187414RNA-binding protein 39-like. (465 aa)
H2XQH7_CIOINRRM domain-containing protein. (283 aa)
zf(rbz)Zinc finger Ran-binding domain-containing protein 2. (237 aa)
H2XR28_CIOINUncharacterized protein. (263 aa)
H2XRH2_CIOINUncharacterized protein. (790 aa)
LOC100181225U6 snRNA-associated Sm-like protein LSm6. (82 aa)
LOC100180841Uncharacterized protein. (472 aa)
H2XSM0_CIOIN5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (832 aa)
H2XSZ1_CIOINU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
LOC100178572Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC100186689PWI domain-containing protein. (159 aa)
LOC100178674Uncharacterized protein. (654 aa)
H2XUQ0_CIOINUncharacterized protein. (262 aa)
H2XUS5_CIOINUncharacterized protein. (250 aa)
H2XUU5_CIOINUncharacterized protein. (532 aa)
H2XUZ2_CIOINUncharacterized protein. (235 aa)
H2XVD0_CIOINUncharacterized protein. (535 aa)
LOC100181195Uncharacterized protein. (739 aa)
H2XVU7_CIOINUncharacterized protein. (125 aa)
H2XW02_CIOINSmall nuclear ribonucleoprotein Sm D2. (118 aa)
LOC104266883Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (239 aa)
H2XWH5_CIOINUncharacterized protein. (140 aa)
H2XWK5_CIOINUncharacterized protein. (1089 aa)
H2XXX1_CIOINUncharacterized protein. (161 aa)
LOC100184713Serine/arginine-rich splicing factor 12 isoform X1. (227 aa)
H2XY34_CIOINUncharacterized protein. (342 aa)
LOC100180305U6 snRNA-associated Sm-like protein LSm7. (99 aa)
H2XZ51_CIOINUncharacterized protein. (176 aa)
LOC100186379G patch domain-containing protein 2. (315 aa)
H2XZG0_CIOINUncharacterized protein. (740 aa)
H2XZL8_CIOINSmall nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (125 aa)
H2Y010_CIOINUSP domain-containing protein. (225 aa)
LOC100180713U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
H2Y0N2_CIOINUncharacterized protein. (424 aa)
LOC100185829Uncharacterized protein. (486 aa)
LOC113474017U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like. (143 aa)
H2Y1I9_CIOINSm domain-containing protein. (115 aa)
H2Y1M0_CIOINSPATA6 domain-containing protein. (152 aa)
RU1C_CIOINU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (122 aa)
zf(cchc)-24Serine/arginine-rich splicing factor 7. (230 aa)
H2Y233_CIOINNuclear cap-binding protein subunit 2. (185 aa)
H2Y2H8_CIOINUncharacterized protein. (258 aa)
H2Y2K8_CIOINUncharacterized protein. (169 aa)
LOC100182620Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
H2Y3Q2_CIOINBtz domain-containing protein. (394 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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