STRINGSTRING
LOC100183816 LOC100183816 H2Y2U3_CIOIN H2Y2U3_CIOIN H2Y0Q6_CIOIN H2Y0Q6_CIOIN LOC100182124 LOC100182124 LOC100180055 LOC100180055 H2XPE7_CIOIN H2XPE7_CIOIN LOC100187159 LOC100187159 LOC100182417 LOC100182417 F7BI62_CIOIN F7BI62_CIOIN LOC100178387 LOC100178387 F6V7G7_CIOIN F6V7G7_CIOIN F7BEQ8_CIOIN F7BEQ8_CIOIN LOC100176016 LOC100176016 LOC100185410 LOC100185410 F6WWT1_CIOIN F6WWT1_CIOIN F7BBN7_CIOIN F7BBN7_CIOIN F6R3K6_CIOIN F6R3K6_CIOIN F6RZE8_CIOIN F6RZE8_CIOIN F6SVM4_CIOIN F6SVM4_CIOIN F6ZAE1_CIOIN F6ZAE1_CIOIN LOC100187398 LOC100187398 LOC101243211 LOC101243211 LOC100175053 LOC100175053 F6U602_CIOIN F6U602_CIOIN F7AVY6_CIOIN F7AVY6_CIOIN F7B7F7_CIOIN F7B7F7_CIOIN F6RWU5_CIOIN F6RWU5_CIOIN F6R8V3_CIOIN F6R8V3_CIOIN F6YFY0_CIOIN F6YFY0_CIOIN F7B4V3_CIOIN F7B4V3_CIOIN F6SLQ4_CIOIN F6SLQ4_CIOIN F6TIK7_CIOIN F6TIK7_CIOIN F6TIU3_CIOIN F6TIU3_CIOIN LOC100181450 LOC100181450 LOC100182767 LOC100182767 F7BH80_CIOIN F7BH80_CIOIN LOC100181765 LOC100181765 LOC100177596 LOC100177596 LOC100175728 LOC100175728 LOC101242392 LOC101242392 LOC100184340 LOC100184340 LOC100184673 LOC100184673 LOC100179457 LOC100179457 LOC100187540 LOC100187540 LOC100178236 LOC100178236 LOC100176223 LOC100176223 F6SID0_CIOIN F6SID0_CIOIN F6V6D5_CIOIN F6V6D5_CIOIN F6V6F4_CIOIN F6V6F4_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100183816Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (306 aa)
H2Y2U3_CIOINEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (240 aa)
H2Y0Q6_CIOINEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (272 aa)
LOC100182124Density-regulated protein-like. (192 aa)
LOC100180055Uncharacterized protein LOC100180055. (140 aa)
H2XPE7_CIOINUncharacterized protein. (122 aa)
LOC100187159Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (356 aa)
LOC100182417Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (498 aa)
F7BI62_CIOINNTP_transferase domain-containing protein. (453 aa)
LOC100178387Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
F6V7G7_CIOINSUI1 domain-containing protein. (109 aa)
F7BEQ8_CIOINMIF4G domain-containing protein. (212 aa)
LOC100176016Malignant T-cell-amplified sequence 1-like. (182 aa)
LOC100185410MPN domain-containing protein. (204 aa)
F6WWT1_CIOINeIF2B_5 domain-containing protein. (267 aa)
F7BBN7_CIOINUncharacterized protein. (637 aa)
F6R3K6_CIOINUncharacterized protein. (1037 aa)
F6RZE8_CIOINRRM domain-containing protein. (329 aa)
F6SVM4_CIOINEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (221 aa)
F6ZAE1_CIOINRRM domain-containing protein. (249 aa)
LOC100187398Eukaryotic translation initiation factor 1A, X-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (188 aa)
LOC101243211Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family. (305 aa)
LOC100175053Uncharacterized protein LOC100175053. (189 aa)
F6U602_CIOINW2 domain-containing protein. (426 aa)
F7AVY6_CIOINUncharacterized protein. (705 aa)
F7B7F7_CIOINUncharacterized protein. (427 aa)
F6RWU5_CIOINMIF4G domain-containing protein. (689 aa)
F6R8V3_CIOINEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1051 aa)
F6YFY0_CIOINTr-type G domain-containing protein. (473 aa)
F7B4V3_CIOINUncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (225 aa)
F6SLQ4_CIOINUncharacterized protein. (257 aa)
F6TIK7_CIOINUncharacterized protein. (480 aa)
F6TIU3_CIOINEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (326 aa)
LOC100181450Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (554 aa)
LOC100182767Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (700 aa)
F7BH80_CIOINUncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (482 aa)
LOC100181765Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (371 aa)
LOC100177596Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family. (430 aa)
LOC100175728Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (583 aa)
LOC101242392Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
LOC100184340Probable RNA-binding protein EIF1AD. (167 aa)
LOC100184673ATP-binding cassette sub-family E member 1. (600 aa)
LOC100179457methionyl-tRNA formyltransferase, mitochondrial. (336 aa)
LOC100187540Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (235 aa)
LOC100178236Eukaryotic translation initiation factor 2D-like. (612 aa)
LOC100176223Tr-type G domain-containing protein. (549 aa)
F6SID0_CIOINEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (443 aa)
F6V6D5_CIOINNTP_transferase domain-containing protein. (267 aa)
F6V6F4_CIOINW2 domain-containing protein. (563 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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