STRINGSTRING
F6XKR6_CIOIN F6XKR6_CIOIN F6WFN8_CIOIN F6WFN8_CIOIN F6SEM6_CIOIN F6SEM6_CIOIN F6ZQ14_CIOIN F6ZQ14_CIOIN LOC100177184 LOC100177184 F6ZZ26_CIOIN F6ZZ26_CIOIN F6R472_CIOIN F6R472_CIOIN F6SQE1_CIOIN F6SQE1_CIOIN F6SQA2_CIOIN F6SQA2_CIOIN F6SQ79_CIOIN F6SQ79_CIOIN LOC100178220 LOC100178220 F6RG85_CIOIN F6RG85_CIOIN F6PW28_CIOIN F6PW28_CIOIN H2Y213_CIOIN H2Y213_CIOIN LOC104265921 LOC104265921 LOC100175446 LOC100175446 H2XYD5_CIOIN H2XYD5_CIOIN LOC100176962 LOC100176962 H2XUY6_CIOIN H2XUY6_CIOIN H2XUU5_CIOIN H2XUU5_CIOIN LOC104265386 LOC104265386 LOC100182516 LOC100182516 H2XM66_CIOIN H2XM66_CIOIN H2XLZ0_CIOIN H2XLZ0_CIOIN H2XLG0_CIOIN H2XLG0_CIOIN zf(ring)-23 zf(ring)-23 F6ZAH0_CIOIN F6ZAH0_CIOIN F6TZN8_CIOIN F6TZN8_CIOIN F6XN27_CIOIN F6XN27_CIOIN F7A9C9_CIOIN F7A9C9_CIOIN LOC100185382 LOC100185382 LOC100175816 LOC100175816 LOC494392 LOC494392 LOC100182071 LOC100182071 F7ANR5_CIOIN F7ANR5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6XKR6_CIOINUncharacterized protein. (180 aa)
F6WFN8_CIOINRING-type domain-containing protein. (237 aa)
F6SEM6_CIOINSAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (256 aa)
F6ZQ14_CIOINRING-type domain-containing protein. (232 aa)
LOC100177184Ubiquitin-conjugating enzyme E2 W-like. (152 aa)
F6ZZ26_CIOINRING-type domain-containing protein. (269 aa)
F6R472_CIOINCULLIN_2 domain-containing protein; Belongs to the cullin family. (707 aa)
F6SQE1_CIOINUncharacterized protein. (651 aa)
F6SQA2_CIOINDTC domain-containing protein. (81 aa)
F6SQ79_CIOINRING-type domain-containing protein. (190 aa)
LOC100178220Zinc finger C4H2 domain-containing protein-like. (227 aa)
F6RG85_CIOINRING-type domain-containing protein. (248 aa)
F6PW28_CIOINCULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
H2Y213_CIOINUncharacterized protein. (124 aa)
LOC104265921E3 ubiquitin protein ligase. (208 aa)
LOC100175446Uncharacterized protein. (366 aa)
H2XYD5_CIOINPeroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (346 aa)
LOC100176962UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
H2XUY6_CIOINCullin_Nedd8 domain-containing protein; Belongs to the cullin family. (145 aa)
H2XUU5_CIOINUncharacterized protein. (532 aa)
LOC104265386Uncharacterized protein. (402 aa)
LOC100182516RING-box protein 1. (104 aa)
H2XM66_CIOINE3 ubiquitin protein ligase. (985 aa)
H2XLZ0_CIOINRING-type domain-containing protein. (223 aa)
H2XLG0_CIOINRING-type domain-containing protein. (354 aa)
zf(ring)-23RING-type domain-containing protein. (319 aa)
F6ZAH0_CIOINUncharacterized protein. (382 aa)
F6TZN8_CIOINWW domain-containing protein. (437 aa)
F6XN27_CIOINUncharacterized protein. (4296 aa)
F7A9C9_CIOINUncharacterized protein. (337 aa)
LOC100185382RING finger protein 219 isoform X1. (618 aa)
LOC100175816TPR_REGION domain-containing protein. (1034 aa)
LOC494392Uncharacterized protein LOC494392. (131 aa)
LOC100182071E3 ubiquitin-protein ligase E3D isoform X1. (517 aa)
F7ANR5_CIOINCPSF_A domain-containing protein. (1145 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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