(18 nodes) Male meiotic nuclear division network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XT98_CIOIN	RECA_2 domain-containing protein. (265 aa)
	H2XJN2_CIOIN	RECA_2 domain-containing protein. (255 aa)
	F7B162_CIOIN	Uncharacterized protein. (208 aa)
	F7B169_CIOIN	MutL_C domain-containing protein. (252 aa)
	F6UIH8_CIOIN	Tudor domain-containing protein. (240 aa)
	F6UII6_CIOIN	Helicase C-terminal domain-containing protein. (205 aa)
	F6UIJ8_CIOIN	Tudor domain-containing protein. (241 aa)
	F6VA91_CIOIN	Uncharacterized protein. (126 aa)
	LOC100182748	DNA_mis_repair domain-containing protein. (751 aa)
	foxj2	Transcription factor protein isoform X1. (560 aa)
	F6RJ65_CIOIN	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
	LOC100176076	Uncharacterized protein LOC100176076. (657 aa)
	LOC100180409	Meiotic recombination protein SPO11. (385 aa)
	F6ZGA4_CIOIN	Uncharacterized protein. (135 aa)
	H2Y2T2_CIOIN	FAT domain-containing protein. (235 aa)
	H2XYN9_CIOIN	Uncharacterized protein. (255 aa)
	H2XU95_CIOIN	Uncharacterized protein. (237 aa)
	H2XU69_CIOIN	Uncharacterized protein. (1220 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RJ65_CIOIN	H2XJN2_CIOIN	ENSCINP00000001490	ENSCINP00000029864	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	RECA_2 domain-containing protein.	0.664
F6RJ65_CIOIN	H2XT98_CIOIN	ENSCINP00000001490	ENSCINP00000032882	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	RECA_2 domain-containing protein.	0.595
F6RJ65_CIOIN	H2Y2T2_CIOIN	ENSCINP00000001490	ENSCINP00000036217	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.949
F6RJ65_CIOIN	LOC100180409	ENSCINP00000001490	ENSCINP00000009041	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Meiotic recombination protein SPO11.	0.496
F6RJ65_CIOIN	LOC100182748	ENSCINP00000001490	ENSCINP00000005229	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA_mis_repair domain-containing protein.	0.652
F6VA91_CIOIN	LOC100176076	ENSCINP00000022570	ENSCINP00000012841	Uncharacterized protein.	Uncharacterized protein LOC100176076.	0.409
F7B162_CIOIN	F7B169_CIOIN	ENSCINP00000024776	ENSCINP00000024775	Uncharacterized protein.	MutL_C domain-containing protein.	0.938
F7B162_CIOIN	H2XT98_CIOIN	ENSCINP00000024776	ENSCINP00000032882	Uncharacterized protein.	RECA_2 domain-containing protein.	0.409
F7B162_CIOIN	LOC100180409	ENSCINP00000024776	ENSCINP00000009041	Uncharacterized protein.	Meiotic recombination protein SPO11.	0.418
F7B162_CIOIN	LOC100182748	ENSCINP00000024776	ENSCINP00000005229	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.954
F7B169_CIOIN	F7B162_CIOIN	ENSCINP00000024775	ENSCINP00000024776	MutL_C domain-containing protein.	Uncharacterized protein.	0.938
F7B169_CIOIN	H2XT98_CIOIN	ENSCINP00000024775	ENSCINP00000032882	MutL_C domain-containing protein.	RECA_2 domain-containing protein.	0.409
F7B169_CIOIN	LOC100180409	ENSCINP00000024775	ENSCINP00000009041	MutL_C domain-containing protein.	Meiotic recombination protein SPO11.	0.418
F7B169_CIOIN	LOC100182748	ENSCINP00000024775	ENSCINP00000005229	MutL_C domain-containing protein.	DNA_mis_repair domain-containing protein.	0.962
H2XJN2_CIOIN	F6RJ65_CIOIN	ENSCINP00000029864	ENSCINP00000001490	RECA_2 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.664
H2XJN2_CIOIN	H2XT98_CIOIN	ENSCINP00000029864	ENSCINP00000032882	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.560
H2XJN2_CIOIN	H2Y2T2_CIOIN	ENSCINP00000029864	ENSCINP00000036217	RECA_2 domain-containing protein.	FAT domain-containing protein.	0.664
H2XJN2_CIOIN	LOC100180409	ENSCINP00000029864	ENSCINP00000009041	RECA_2 domain-containing protein.	Meiotic recombination protein SPO11.	0.709
H2XJN2_CIOIN	LOC100182748	ENSCINP00000029864	ENSCINP00000005229	RECA_2 domain-containing protein.	DNA_mis_repair domain-containing protein.	0.587
H2XT98_CIOIN	F6RJ65_CIOIN	ENSCINP00000032882	ENSCINP00000001490	RECA_2 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.595