(60 nodes) Fatty acid catabolic process network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6TS86_CIOIN	Carn_acyltransf domain-containing protein. (603 aa)
	F6T4P9_CIOIN	Acyl-CoA_dh_1 domain-containing protein. (82 aa)
	LOC100181214	ATP-binding cassette sub-family D member 3-like. (658 aa)
	F6SE92_CIOIN	TPP_enzyme_N domain-containing protein. (220 aa)
	LOC100184407	Uncharacterized protein. (283 aa)
	LOC100186995	enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	LOC100183445	3-hydroxybutyrate dehydrogenase type 2-like. (248 aa)
	F6X4A8_CIOIN	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (262 aa)
	F6SU61_CIOIN	Uncharacterized protein. (286 aa)
	LOC100181154	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (598 aa)
	F6PNW9_CIOIN	Uncharacterized protein. (789 aa)
	LOC100185648	Uncharacterized protein. (301 aa)
	LOC100180564	Peroxisomal bifunctional enzyme-like isoform X1. (486 aa)
	LOC100182913	Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (731 aa)
	LOC100187271	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (599 aa)
	F6ZME6_CIOIN	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)
	F6WXR3_CIOIN	Uncharacterized protein. (764 aa)
	LOC100187496	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial-like. (309 aa)
	F7AW82_CIOIN	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (662 aa)
	F6XUS6_CIOIN	Uncharacterized protein. (1013 aa)
	F6TFC4_CIOIN	LRRNT domain-containing protein. (542 aa)
	F7B684_CIOIN	AMP-binding domain-containing protein. (656 aa)
	F6XBY1_CIOIN	ACB domain-containing protein. (390 aa)
	H2Y3Q1_CIOIN	Carn_acyltransf domain-containing protein. (719 aa)
	H2XZN8_CIOIN	WD_REPEATS_REGION domain-containing protein. (186 aa)
	H2XY21_CIOIN	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (672 aa)
	H2XVL0_CIOIN	Uncharacterized protein. (223 aa)
	H2XUF4_CIOIN	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)
	H2XSH7_CIOIN	Uncharacterized protein. (292 aa)
	H2XS64_CIOIN	Uncharacterized protein. (83 aa)
	H2XPA9_CIOIN	Uncharacterized protein. (56 aa)
	H2XNI1_CIOIN	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (603 aa)
	LOC100181360	Uncharacterized protein. (641 aa)
	F6X2L1_CIOIN	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (217 aa)
	F6W5P0_CIOIN	TPP_enzyme_C domain-containing protein. (175 aa)
	F6TZ79_CIOIN	Acyl-CoA_dh_M domain-containing protein. (200 aa)
	F6PML6_CIOIN	Nudix hydrolase domain-containing protein. (230 aa)
	ppar	Nuclear receptor. (644 aa)
	F7A8X9_CIOIN	Uncharacterized protein. (201 aa)
	LOC100186673	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (660 aa)
	F7AX37_CIOIN	LNS2 domain-containing protein. (935 aa)
	LOC100180056	Long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X3. (421 aa)
	LOC101242316	3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
	F7A5Y1_CIOIN	Uncharacterized protein. (532 aa)
	LOC100187421	Peroxisomal multifunctional enzyme type 2. (720 aa)
	LOC100185844	Hydrolase_4 domain-containing protein. (396 aa)
	F6THC9_CIOIN	Uncharacterized protein. (537 aa)
	LOC100175495	Phospholipase ABHD3. (378 aa)
	LOC100175883	ETF domain-containing protein. (254 aa)
	F6YRI1_CIOIN	Uncharacterized protein. (742 aa)
	LOC100178631	Uncharacterized protein; Belongs to the TPP enzyme family. (589 aa)
	LOC100180098	phytanoyl-CoA dioxygenase, peroxisomal-like. (329 aa)
	LOC100184635	Uncharacterized protein. (401 aa)
	F6RJV3_CIOIN	ETF domain-containing protein. (334 aa)
	F6VR09_CIOIN	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (478 aa)
	LOC100181980	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (725 aa)
	LOC100177066	Uncharacterized protein. (641 aa)
	LOC100186223	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (671 aa)
	F6U222_CIOIN	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (659 aa)
	F6WQJ7_CIOIN	Uncharacterized protein. (126 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PML6_CIOIN	F7A5Y1_CIOIN	ENSCINP00000025078	ENSCINP00000018917	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.408
F6PML6_CIOIN	LOC100184407	ENSCINP00000025078	ENSCINP00000001072	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.477
F6PNW9_CIOIN	F6SE92_CIOIN	ENSCINP00000004736	ENSCINP00000000744	Uncharacterized protein.	TPP_enzyme_N domain-containing protein.	0.487
F6PNW9_CIOIN	F6TZ79_CIOIN	ENSCINP00000004736	ENSCINP00000025976	Uncharacterized protein.	Acyl-CoA_dh_M domain-containing protein.	0.433
F6PNW9_CIOIN	F6VR09_CIOIN	ENSCINP00000004736	ENSCINP00000012665	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.424
F6PNW9_CIOIN	F6W5P0_CIOIN	ENSCINP00000004736	ENSCINP00000028050	Uncharacterized protein.	TPP_enzyme_C domain-containing protein.	0.469
F6PNW9_CIOIN	F6WQJ7_CIOIN	ENSCINP00000004736	ENSCINP00000011770	Uncharacterized protein.	Uncharacterized protein.	0.607
F6PNW9_CIOIN	F6X2L1_CIOIN	ENSCINP00000004736	ENSCINP00000029139	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.445
F6PNW9_CIOIN	F6XBY1_CIOIN	ENSCINP00000004736	ENSCINP00000011768	Uncharacterized protein.	ACB domain-containing protein.	0.607
F6PNW9_CIOIN	F7A5Y1_CIOIN	ENSCINP00000004736	ENSCINP00000018917	Uncharacterized protein.	Uncharacterized protein.	0.624
F6PNW9_CIOIN	F7A8X9_CIOIN	ENSCINP00000004736	ENSCINP00000023655	Uncharacterized protein.	Uncharacterized protein.	0.607
F6PNW9_CIOIN	H2XSH7_CIOIN	ENSCINP00000004736	ENSCINP00000032611	Uncharacterized protein.	Uncharacterized protein.	0.437
F6PNW9_CIOIN	H2XUF4_CIOIN	ENSCINP00000004736	ENSCINP00000033288	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.437
F6PNW9_CIOIN	H2XVL0_CIOIN	ENSCINP00000004736	ENSCINP00000033694	Uncharacterized protein.	Uncharacterized protein.	0.460
F6PNW9_CIOIN	LOC100178631	ENSCINP00000004736	ENSCINP00000013826	Uncharacterized protein.	Uncharacterized protein; Belongs to the TPP enzyme family.	0.496
F6PNW9_CIOIN	LOC100180564	ENSCINP00000004736	ENSCINP00000006081	Uncharacterized protein.	Peroxisomal bifunctional enzyme-like isoform X1.	0.456
F6PNW9_CIOIN	LOC100181154	ENSCINP00000004736	ENSCINP00000004269	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.433
F6PNW9_CIOIN	LOC100181980	ENSCINP00000004736	ENSCINP00000012644	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.471
F6PNW9_CIOIN	LOC100182913	ENSCINP00000004736	ENSCINP00000006089	Uncharacterized protein.	Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.	0.456
F6PNW9_CIOIN	LOC100184635	ENSCINP00000004736	ENSCINP00000013343	Uncharacterized protein.	Uncharacterized protein.	0.469