STRINGSTRING
LOC100178882 LOC100178882 LOC100182102 LOC100182102 LOC100176030 LOC100176030 F6RJ65_CIOIN F6RJ65_CIOIN F6VK85_CIOIN F6VK85_CIOIN F6UJF1_CIOIN F6UJF1_CIOIN gsk gsk LOC100179496 LOC100179496 F6ZRJ8_CIOIN F6ZRJ8_CIOIN F6W2R0_CIOIN F6W2R0_CIOIN LOC100186582 LOC100186582 LOC100184788 LOC100184788 F6SPE4_CIOIN F6SPE4_CIOIN H2XJF2_CIOIN H2XJF2_CIOIN F6YT91_CIOIN F6YT91_CIOIN LOC100181489 LOC100181489 F6WU40_CIOIN F6WU40_CIOIN LOC100181041 LOC100181041 F6XUD5_CIOIN F6XUD5_CIOIN F6V9F0_CIOIN F6V9F0_CIOIN LOC100176903 LOC100176903 LOC100179839 LOC100179839 F7A9G9_CIOIN F7A9G9_CIOIN LOC100187265 LOC100187265 F6PMK8_CIOIN F6PMK8_CIOIN Xbpa Xbpa LOC100180665 LOC100180665 LOC100176751 LOC100176751 F6UTD4_CIOIN F6UTD4_CIOIN F6U6A2_CIOIN F6U6A2_CIOIN LOC100176909 LOC100176909 F6WPI9_CIOIN F6WPI9_CIOIN LOC100176674 LOC100176674 LOC100185251-2 LOC100185251-2 F6WDL8_CIOIN F6WDL8_CIOIN F7BL69_CIOIN F7BL69_CIOIN foxk foxk F6RS66_CIOIN F6RS66_CIOIN Zf(ring)-19 Zf(ring)-19 F6PQM2_CIOIN F6PQM2_CIOIN F6PQJ9_CIOIN F6PQJ9_CIOIN F6ZAD3_CIOIN F6ZAD3_CIOIN xbpd xbpd F6T7E5_CIOIN F6T7E5_CIOIN LOC100180438 LOC100180438 F6TGX2_CIOIN F6TGX2_CIOIN F7A9X0_CIOIN F7A9X0_CIOIN LOC100181904 LOC100181904 LOC100178394 LOC100178394 F6UQM6_CIOIN F6UQM6_CIOIN F6QHM7_CIOIN F6QHM7_CIOIN F6R4D8_CIOIN F6R4D8_CIOIN F6WN54_CIOIN F6WN54_CIOIN F7ADE5_CIOIN F7ADE5_CIOIN xbpb xbpb F6TJR3_CIOIN F6TJR3_CIOIN F6ZLD5_CIOIN F6ZLD5_CIOIN F6WK69_CIOIN F6WK69_CIOIN F6XUK8_CIOIN F6XUK8_CIOIN F7AV79_CIOIN F7AV79_CIOIN F6V7C2_CIOIN F6V7C2_CIOIN F6YY15_CIOIN F6YY15_CIOIN LOC100183442 LOC100183442 Xbpc Xbpc LOC100181974 LOC100181974 F7A7B2_CIOIN F7A7B2_CIOIN F6TZN8_CIOIN F6TZN8_CIOIN Zf(fyve)-6 Zf(fyve)-6 F6SLD6_CIOIN F6SLD6_CIOIN Htt Htt F6VH27_CIOIN F6VH27_CIOIN LOC100179954 LOC100179954 LOC100187458 LOC100187458 LOC100179621 LOC100179621 LOC100182401 LOC100182401 LOC100178802 LOC100178802 H2XM17_CIOIN H2XM17_CIOIN LOC100182592 LOC100182592 H2XMA8_CIOIN H2XMA8_CIOIN H2XMX0_CIOIN H2XMX0_CIOIN H2XMY5_CIOIN H2XMY5_CIOIN H2XPE2_CIOIN H2XPE2_CIOIN H2XPH2_CIOIN H2XPH2_CIOIN H2XSM3_CIOIN H2XSM3_CIOIN atg5 atg5 H2XV25_CIOIN H2XV25_CIOIN H2XWT8_CIOIN H2XWT8_CIOIN LOC100183633 LOC100183633 H2XX21_CIOIN H2XX21_CIOIN LOC100182050 LOC100182050 H2XXY3_CIOIN H2XXY3_CIOIN H2XY78_CIOIN H2XY78_CIOIN H2Y066_CIOIN H2Y066_CIOIN LOC101242365 LOC101242365 H2Y0W5_CIOIN H2Y0W5_CIOIN LOC100181469 LOC100181469 H2Y204_CIOIN H2Y204_CIOIN H2Y2T2_CIOIN H2Y2T2_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100178882Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (167 aa)
LOC100182102Glial fibrillary acidic protein; Belongs to the intermediate filament family. (439 aa)
LOC100176030WD_REPEATS_REGION domain-containing protein. (1206 aa)
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
F6VK85_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
F6UJF1_CIOINUDENN FLCN/SMCR8-type domain-containing protein. (561 aa)
gskGlycogen synthase kinase Alpha/beta. (407 aa)
LOC100179496Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (622 aa)
F6ZRJ8_CIOINUncharacterized protein. (365 aa)
F6W2R0_CIOINUncharacterized protein. (249 aa)
LOC100186582Phosphoinositide 3-kinase regulatory subunit 4. (1337 aa)
LOC100184788Non-specific serine/threonine protein kinase. (554 aa)
F6SPE4_CIOINUncharacterized protein. (185 aa)
H2XJF2_CIOINPhosphatidylinositol 3-kinase catalytic subunit type 3. (931 aa)
F6YT91_CIOINUncharacterized protein. (800 aa)
LOC100181489GLTP domain-containing protein. (226 aa)
F6WU40_CIOINRicin B-type lectin domain-containing protein. (789 aa)
LOC100181041Myotubularin-related protein 9 isoform X1. (562 aa)
F6XUD5_CIOINAminotran_1_2 domain-containing protein. (477 aa)
F6V9F0_CIOINAminotran_1_2 domain-containing protein. (343 aa)
LOC100176903Carboxypeptidase; Belongs to the peptidase S10 family. (420 aa)
LOC100179839Sorting nexin-4-like. (441 aa)
F7A9G9_CIOINRING-type domain-containing protein. (966 aa)
LOC100187265Uncharacterized protein. (949 aa)
F6PMK8_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)
XbpaBZIP domain-containing protein. (309 aa)
LOC100180665Ras-related GTP-binding protein C. (371 aa)
LOC100176751UV radiation resistance associated protein. (760 aa)
F6UTD4_CIOINVps5 domain-containing protein. (96 aa)
F6U6A2_CIOINPX domain-containing protein. (255 aa)
LOC100176909Ubiquitin carboxyl-terminal hydrolase 10-like; Belongs to the peptidase C19 family. (714 aa)
F6WPI9_CIOINFPL domain-containing protein. (803 aa)
LOC100176674CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (278 aa)
LOC100185251-2Zinc finger protein. (339 aa)
F6WDL8_CIOINDEP domain-containing protein. (565 aa)
F7BL69_CIOINWD_REPEATS_REGION domain-containing protein. (598 aa)
foxkUncharacterized protein. (614 aa)
F6RS66_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (462 aa)
Zf(ring)-19Uncharacterized protein. (722 aa)
F6PQM2_CIOINPIPK domain-containing protein. (152 aa)
F6PQJ9_CIOINPIPK domain-containing protein. (165 aa)
F6ZAD3_CIOINRap-GAP domain-containing protein. (1434 aa)
xbpdTranscription factor protein isoform X1. (366 aa)
F6T7E5_CIOINUncharacterized protein. (478 aa)
LOC100180438Polymerase delta-interacting protein 2-like. (376 aa)
F6TGX2_CIOINUncharacterized protein. (315 aa)
F7A9X0_CIOINProtein kinase domain-containing protein. (772 aa)
LOC100181904Rhomboid protein 1, mitochondrial. (419 aa)
LOC100178394F-box only protein 7. (515 aa)
F6UQM6_CIOINMic1 domain-containing protein. (639 aa)
F6QHM7_CIOINUncharacterized protein. (725 aa)
F6R4D8_CIOINRab-GAP TBC domain-containing protein. (590 aa)
F6WN54_CIOINUncharacterized protein. (965 aa)
F7ADE5_CIOINAPG6 domain-containing protein. (127 aa)
xbpbTranscription factor protein. (238 aa)
F6TJR3_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (242 aa)
F6ZLD5_CIOINProtein kinase domain-containing protein. (164 aa)
F6WK69_CIOINWD_REPEATS_REGION domain-containing protein. (805 aa)
F6XUK8_CIOINUncharacterized protein. (309 aa)
F7AV79_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (228 aa)
F6V7C2_CIOINProtein kinase domain-containing protein. (521 aa)
F6YY15_CIOINERCC4 domain-containing protein. (826 aa)
LOC100183442GATOR complex protein NPRL2-like. (392 aa)
XbpcBZIP domain-containing protein. (437 aa)
LOC100181974WD repeat-containing protein 6-like. (158 aa)
F7A7B2_CIOINUncharacterized protein. (288 aa)
F6TZN8_CIOINWW domain-containing protein. (437 aa)
Zf(fyve)-6Uncharacterized protein. (1125 aa)
F6SLD6_CIOINDeacetylase sirtuin-type domain-containing protein. (737 aa)
HttUncharacterized protein. (639 aa)
F6VH27_CIOINUncharacterized protein. (182 aa)
LOC100179954ZnF_CDGSH domain-containing protein. (136 aa)
LOC100187458Small VCP/p97-interacting protein. (76 aa)
LOC100179621Short coiled-coil protein B-like. (120 aa)
LOC100182401Beclin 1-associated autophagy-related key regulator. (512 aa)
LOC100178802Transcription elongation factor SPT5. (1047 aa)
H2XM17_CIOINFAT domain-containing protein. (187 aa)
LOC100182592BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like. (202 aa)
H2XMA8_CIOINUncharacterized protein. (446 aa)
H2XMX0_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (143 aa)
H2XMY5_CIOINUncharacterized protein. (281 aa)
H2XPE2_CIOINUncharacterized protein. (744 aa)
H2XPH2_CIOINDUF3385 domain-containing protein. (265 aa)
H2XSM3_CIOINUncharacterized protein. (291 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (268 aa)
H2XV25_CIOINUncharacterized protein. (652 aa)
H2XWT8_CIOINUncharacterized protein. (206 aa)
LOC100183633Death-associated protein 1-like. (103 aa)
H2XX21_CIOINUncharacterized protein. (276 aa)
LOC100182050DNA damage-regulated autophagy modulator protein 2. (269 aa)
H2XXY3_CIOINUncharacterized protein. (1316 aa)
H2XY78_CIOINUncharacterized protein. (207 aa)
H2Y066_CIOINUncharacterized protein. (361 aa)
LOC101242365Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (98 aa)
H2Y0W5_CIOINFATC domain-containing protein. (201 aa)
LOC100181469Uncharacterized protein LOC100181469 isoform X2. (379 aa)
H2Y204_CIOINUncharacterized protein. (246 aa)
H2Y2T2_CIOINFAT domain-containing protein. (235 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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