(9 nodes) Epithelial structure maintenance network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2Y074_CIOIN	Uncharacterized protein. (275 aa)
	LOC101243096	Trefoil factor 2-like. (119 aa)
	H2XTN1_CIOIN	Uncharacterized protein. (141 aa)
	srf	Transcription factor protein. (335 aa)
	H2XQW5_CIOIN	Uncharacterized protein. (186 aa)
	H2XQ82_CIOIN	Uncharacterized protein. (217 aa)
	F6RDQ7_CIOIN	Uncharacterized protein. (591 aa)
	LOC100180223	Phenazine biosynthesis-like domain-containing protein 1. (289 aa)
	LOC100176230	WD_REPEATS_REGION domain-containing protein. (328 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2XQ82_CIOIN	H2XQW5_CIOIN	ENSCINP00000031816	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQ82_CIOIN	H2XTN1_CIOIN	ENSCINP00000031816	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XQ82_CIOIN	H2Y074_CIOIN	ENSCINP00000031816	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.942
H2XQW5_CIOIN	H2XQ82_CIOIN	ENSCINP00000032049	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQW5_CIOIN	H2XTN1_CIOIN	ENSCINP00000032049	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XQW5_CIOIN	H2Y074_CIOIN	ENSCINP00000032049	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.947
H2XTN1_CIOIN	H2XQ82_CIOIN	ENSCINP00000033015	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XTN1_CIOIN	H2XQW5_CIOIN	ENSCINP00000033015	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XTN1_CIOIN	H2Y074_CIOIN	ENSCINP00000033015	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.925
H2Y074_CIOIN	H2XQ82_CIOIN	ENSCINP00000035308	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.942
H2Y074_CIOIN	H2XQW5_CIOIN	ENSCINP00000035308	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.947
H2Y074_CIOIN	H2XTN1_CIOIN	ENSCINP00000035308	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.925
LOC100176230	LOC100180223	ENSCINP00000000933	ENSCINP00000003373	WD_REPEATS_REGION domain-containing protein.	Phenazine biosynthesis-like domain-containing protein 1.	0.627
LOC100180223	LOC100176230	ENSCINP00000003373	ENSCINP00000000933	Phenazine biosynthesis-like domain-containing protein 1.	WD_REPEATS_REGION domain-containing protein.	0.627