STRINGSTRING
LOC100178882 LOC100178882 F6UWK1_CIOIN F6UWK1_CIOIN F6TLJ7_CIOIN F6TLJ7_CIOIN F6TLB6_CIOIN F6TLB6_CIOIN LOC100176196 LOC100176196 F6TJR3_CIOIN F6TJR3_CIOIN F7AV79_CIOIN F7AV79_CIOIN F6V3W8_CIOIN F6V3W8_CIOIN F6W3W9_CIOIN F6W3W9_CIOIN F6T2G1_CIOIN F6T2G1_CIOIN LOC100186675 LOC100186675 H2XMX0_CIOIN H2XMX0_CIOIN H2XWW8_CIOIN H2XWW8_CIOIN H2Y0Z3_CIOIN H2Y0Z3_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100178882Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (167 aa)
F6UWK1_CIOINTFCD_C domain-containing protein. (1191 aa)
F6TLJ7_CIOINUncharacterized protein. (895 aa)
F6TLB6_CIOINUncharacterized protein. (891 aa)
LOC100176196Protein RCC2 homolog. (475 aa)
F6TJR3_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (242 aa)
F7AV79_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (228 aa)
F6V3W8_CIOINUncharacterized protein. (264 aa)
F6W3W9_CIOINUncharacterized protein. (758 aa)
F6T2G1_CIOINUncharacterized protein. (298 aa)
LOC100186675AP-1 complex-associated regulatory protein isoform X1. (287 aa)
H2XMX0_CIOINAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (143 aa)
H2XWW8_CIOINOlfactomedin-like domain-containing protein. (121 aa)
H2Y0Z3_CIOINRho-GAP domain-containing protein. (245 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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