(7 nodes) DNA translocase activity network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7AWL5_CIOIN	F-box domain-containing protein. (431 aa)
	F6PL57_CIOIN	Uncharacterized protein. (1087 aa)
	F6UXF1_CIOIN	Helicase ATP-binding domain-containing protein. (259 aa)
	LOC100178294	Uncharacterized protein. (765 aa)
	H2XJT4_CIOIN	PHD-type domain-containing protein. (508 aa)
	F6XCR2_CIOIN	Helicase C-terminal domain-containing protein. (353 aa)
	F6XHT6_CIOIN	UvrD-like helicase C-terminal domain-containing protein. (212 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6UXF1_CIOIN	F6XCR2_CIOIN	ENSCINP00000019402	ENSCINP00000023723	Helicase ATP-binding domain-containing protein.	Helicase C-terminal domain-containing protein.	0.951
F6UXF1_CIOIN	LOC100178294	ENSCINP00000019402	ENSCINP00000036432	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.463
F6XCR2_CIOIN	F6UXF1_CIOIN	ENSCINP00000023723	ENSCINP00000019402	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.951
F6XCR2_CIOIN	LOC100178294	ENSCINP00000023723	ENSCINP00000036432	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.448
F6XHT6_CIOIN	F7AWL5_CIOIN	ENSCINP00000019609	ENSCINP00000023021	UvrD-like helicase C-terminal domain-containing protein.	F-box domain-containing protein.	0.498
F6XHT6_CIOIN	LOC100178294	ENSCINP00000019609	ENSCINP00000036432	UvrD-like helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.705
F7AWL5_CIOIN	F6XHT6_CIOIN	ENSCINP00000023021	ENSCINP00000019609	F-box domain-containing protein.	UvrD-like helicase C-terminal domain-containing protein.	0.498
F7AWL5_CIOIN	LOC100178294	ENSCINP00000023021	ENSCINP00000036432	F-box domain-containing protein.	Uncharacterized protein.	0.705
LOC100178294	F6UXF1_CIOIN	ENSCINP00000036432	ENSCINP00000019402	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.463
LOC100178294	F6XCR2_CIOIN	ENSCINP00000036432	ENSCINP00000023723	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.448
LOC100178294	F6XHT6_CIOIN	ENSCINP00000036432	ENSCINP00000019609	Uncharacterized protein.	UvrD-like helicase C-terminal domain-containing protein.	0.705
LOC100178294	F7AWL5_CIOIN	ENSCINP00000036432	ENSCINP00000023021	Uncharacterized protein.	F-box domain-containing protein.	0.705