(8 nodes) GABA receptor activity network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100180207	G_PROTEIN_RECEP_F3_4 domain-containing protein. (339 aa)
	F7B293_CIOIN	Neur_chan_LBD domain-containing protein. (158 aa)
	F7AQ62_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (769 aa)
	F6YG13_CIOIN	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (446 aa)
	F6YFX5_CIOIN	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (482 aa)
	F6Z916_CIOIN	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (405 aa)
	F6ZIL3_CIOIN	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (202 aa)
	H2XVB8_CIOIN	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (340 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6YFX5_CIOIN	F6YG13_CIOIN	ENSCINP00000008779	ENSCINP00000008772	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.965
F6YFX5_CIOIN	F6Z916_CIOIN	ENSCINP00000008779	ENSCINP00000011153	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.632
F6YFX5_CIOIN	F6ZIL3_CIOIN	ENSCINP00000008779	ENSCINP00000027830	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.573
F6YFX5_CIOIN	H2XVB8_CIOIN	ENSCINP00000008779	ENSCINP00000033602	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.607
F6YG13_CIOIN	F6YFX5_CIOIN	ENSCINP00000008772	ENSCINP00000008779	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.965
F6YG13_CIOIN	F6Z916_CIOIN	ENSCINP00000008772	ENSCINP00000011153	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.894
F6YG13_CIOIN	F6ZIL3_CIOIN	ENSCINP00000008772	ENSCINP00000027830	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.869
F6YG13_CIOIN	F7AQ62_CIOIN	ENSCINP00000008772	ENSCINP00000006905	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.446
F6YG13_CIOIN	F7B293_CIOIN	ENSCINP00000008772	ENSCINP00000005369	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.686
F6YG13_CIOIN	H2XVB8_CIOIN	ENSCINP00000008772	ENSCINP00000033602	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.920
F6YG13_CIOIN	LOC100180207	ENSCINP00000008772	ENSCINP00000004214	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.446
F6Z916_CIOIN	F6YFX5_CIOIN	ENSCINP00000011153	ENSCINP00000008779	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.632
F6Z916_CIOIN	F6YG13_CIOIN	ENSCINP00000011153	ENSCINP00000008772	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.894
F6Z916_CIOIN	F6ZIL3_CIOIN	ENSCINP00000011153	ENSCINP00000027830	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.588
F6Z916_CIOIN	H2XVB8_CIOIN	ENSCINP00000011153	ENSCINP00000033602	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.614
F6ZIL3_CIOIN	F6YFX5_CIOIN	ENSCINP00000027830	ENSCINP00000008779	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.573
F6ZIL3_CIOIN	F6YG13_CIOIN	ENSCINP00000027830	ENSCINP00000008772	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.869
F6ZIL3_CIOIN	F6Z916_CIOIN	ENSCINP00000027830	ENSCINP00000011153	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.588
F6ZIL3_CIOIN	H2XVB8_CIOIN	ENSCINP00000027830	ENSCINP00000033602	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.903
F7AQ62_CIOIN	F6YG13_CIOIN	ENSCINP00000006905	ENSCINP00000008772	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.446