(46 nodes) Regulation of exocytosis network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XTE8_CIOIN	C2 domain-containing protein. (167 aa)
	LOC104265386	Uncharacterized protein. (402 aa)
	H2XNH1_CIOIN	Uncharacterized protein. (191 aa)
	F6SWJ9_CIOIN	Uncharacterized protein. (130 aa)
	zf(fyve)-11	Uncharacterized protein. (717 aa)
	LOC100180144	Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (438 aa)
	LOC100181289	Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	Syt1	Uncharacterized protein. (328 aa)
	F6RZ52_CIOIN	Uncharacterized protein. (498 aa)
	F6QHM7_CIOIN	Uncharacterized protein. (725 aa)
	F6PKW3_CIOIN	Tyrosine-protein kinase. (838 aa)
	LOC100183241	Ras-related protein Rab-10-like isoform X1. (207 aa)
	LOC100186863	PDZ domain-containing protein GIPC1. (316 aa)
	F6PHZ4_CIOIN	Uncharacterized protein. (266 aa)
	LOC100175291	Uncharacterized protein LOC100175291. (180 aa)
	F6SPF7_CIOIN	Uncharacterized protein. (438 aa)
	F6ZLD5_CIOIN	Protein kinase domain-containing protein. (164 aa)
	F7BDH1_CIOIN	BRO1 domain-containing protein. (902 aa)
	F6TF93_CIOIN	Uncharacterized protein. (311 aa)
	F6TF85_CIOIN	Apt1 domain-containing protein. (574 aa)
	F6VRM1_CIOIN	Uncharacterized protein. (181 aa)
	F7BKM3_CIOIN	Uncharacterized protein. (506 aa)
	F6XND0_CIOIN	Uncharacterized protein. (233 aa)
	F6UYT5_CIOIN	AC_N domain-containing protein. (314 aa)
	LOC100176356	SNARE-associated protein Snapin-like. (133 aa)
	H2Y1U8_CIOIN	Uncharacterized protein. (232 aa)
	Rap1b	Uncharacterized protein. (184 aa)
	LOC100177266	Uncharacterized protein. (211 aa)
	F6U1C4_CIOIN	Uncharacterized protein. (318 aa)
	LOC100182857	Synaptotagmin-5-like isoform X1. (447 aa)
	LOC100186896	Uncharacterized protein. (791 aa)
	ci-arfgap-3	Zinc finger protein Ci-ArfGAP-3. (760 aa)
	LOC100185758	Ras-related protein Rab-10-like. (202 aa)
	F6TT57_CIOIN	Uncharacterized protein. (762 aa)
	LOC100179839	Sorting nexin-4-like. (441 aa)
	F7B9A9_CIOIN	Uncharacterized protein. (1197 aa)
	F6UTA8_CIOIN	Uncharacterized protein. (856 aa)
	H2XUP2_CIOIN	V-SNARE coiled-coil homology domain-containing protein. (84 aa)
	H2XVL2_CIOIN	Uncharacterized protein. (236 aa)
	H2XWC0_CIOIN	Uncharacterized protein. (120 aa)
	H2XWH4_CIOIN	LLGL domain-containing protein. (101 aa)
	LOC100182780	Ras-related protein Rab-3. (220 aa)
	H2XWT7_CIOIN	Fmp27_GFWDK domain-containing protein. (247 aa)
	H2XXT9_CIOIN	Uncharacterized protein. (276 aa)
	LOC100186168	Ras-related protein Rab-26-like. (223 aa)
	LOC100185122	Uncharacterized protein. (863 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PHZ4_CIOIN	F7BDH1_CIOIN	ENSCINP00000020279	ENSCINP00000023330	Uncharacterized protein.	BRO1 domain-containing protein.	0.619
F6PHZ4_CIOIN	H2XUP2_CIOIN	ENSCINP00000020279	ENSCINP00000033376	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.414
F6PHZ4_CIOIN	LOC104265386	ENSCINP00000020279	ENSCINP00000031475	Uncharacterized protein.	Uncharacterized protein.	0.959
F6PHZ4_CIOIN	ci-arfgap-3	ENSCINP00000020279	ENSCINP00000005788	Uncharacterized protein.	Zinc finger protein Ci-ArfGAP-3.	0.425
F6PHZ4_CIOIN	zf(fyve)-11	ENSCINP00000020279	ENSCINP00000013389	Uncharacterized protein.	Uncharacterized protein.	0.999
F6SPF7_CIOIN	H2XTE8_CIOIN	ENSCINP00000022051	ENSCINP00000032932	Uncharacterized protein.	C2 domain-containing protein.	0.477
F6SPF7_CIOIN	LOC100182780	ENSCINP00000022051	ENSCINP00000034074	Uncharacterized protein.	Ras-related protein Rab-3.	0.467
F6SWJ9_CIOIN	F6XND0_CIOIN	ENSCINP00000026601	ENSCINP00000024885	Uncharacterized protein.	Uncharacterized protein.	0.417
F6SWJ9_CIOIN	H2Y1U8_CIOIN	ENSCINP00000026601	ENSCINP00000035883	Uncharacterized protein.	Uncharacterized protein.	0.417
F6SWJ9_CIOIN	LOC104265386	ENSCINP00000026601	ENSCINP00000031475	Uncharacterized protein.	Uncharacterized protein.	0.509
F6SWJ9_CIOIN	zf(fyve)-11	ENSCINP00000026601	ENSCINP00000013389	Uncharacterized protein.	Uncharacterized protein.	0.474
F6TF85_CIOIN	F6TF93_CIOIN	ENSCINP00000023572	ENSCINP00000023571	Apt1 domain-containing protein.	Uncharacterized protein.	0.401
F6TF85_CIOIN	H2XNH1_CIOIN	ENSCINP00000023572	ENSCINP00000031204	Apt1 domain-containing protein.	Uncharacterized protein.	0.684
F6TF85_CIOIN	H2XVL2_CIOIN	ENSCINP00000023572	ENSCINP00000033696	Apt1 domain-containing protein.	Uncharacterized protein.	0.943
F6TF85_CIOIN	H2XWT7_CIOIN	ENSCINP00000023572	ENSCINP00000034121	Apt1 domain-containing protein.	Fmp27_GFWDK domain-containing protein.	0.945
F6TF93_CIOIN	F6TF85_CIOIN	ENSCINP00000023571	ENSCINP00000023572	Uncharacterized protein.	Apt1 domain-containing protein.	0.401
F6TF93_CIOIN	H2XNH1_CIOIN	ENSCINP00000023571	ENSCINP00000031204	Uncharacterized protein.	Uncharacterized protein.	0.401
F6TF93_CIOIN	H2XWT7_CIOIN	ENSCINP00000023571	ENSCINP00000034121	Uncharacterized protein.	Fmp27_GFWDK domain-containing protein.	0.429
F6U1C4_CIOIN	F6VRM1_CIOIN	ENSCINP00000001641	ENSCINP00000024625	Uncharacterized protein.	Uncharacterized protein.	0.477
F6U1C4_CIOIN	LOC100182780	ENSCINP00000001641	ENSCINP00000034074	Uncharacterized protein.	Ras-related protein Rab-3.	0.650