(18 nodes) Peptidyl-lysine trimethylation network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100182087	WD repeat-containing protein 61-like. (305 aa)
	F6RSF3_CIOIN	SET domain-containing protein. (227 aa)
	F7BBJ6_CIOIN	WD_REPEATS_REGION domain-containing protein. (473 aa)
	F6PWM6_CIOIN	Protein-histidine N-methyltransferase. (488 aa)
	LOC100181206	TPR_REGION domain-containing protein. (1027 aa)
	F6PX81_CIOIN	Plus3 domain-containing protein. (336 aa)
	F6ZIF8_CIOIN	CBFD_NFYB_HMF domain-containing protein. (263 aa)
	LOC100175816	TPR_REGION domain-containing protein. (1034 aa)
	LOC100181112	WD_REPEATS_REGION domain-containing protein. (317 aa)
	LOC100185470	Protein N-lysine methyltransferase FAM173B. (212 aa)
	F6PI16_CIOIN	Uncharacterized protein. (234 aa)
	Rbp1-like	ARID domain-containing protein. (1195 aa)
	F6YDS2_CIOIN	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (434 aa)
	LOC778705	Uncharacterized protein. (383 aa)
	H2XU12_CIOIN	Uncharacterized protein. (189 aa)
	F6UMR8_CIOIN	Uncharacterized protein. (477 aa)
	F6UMH0_CIOIN	WW domain-containing protein. (284 aa)
	H2XN90_CIOIN	Uncharacterized protein. (224 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PX81_CIOIN	H2XU12_CIOIN	ENSCINP00000013055	ENSCINP00000033146	Plus3 domain-containing protein.	Uncharacterized protein.	0.440
F6PX81_CIOIN	LOC100175816	ENSCINP00000013055	ENSCINP00000018251	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.979
F6PX81_CIOIN	LOC100182087	ENSCINP00000013055	ENSCINP00000031610	Plus3 domain-containing protein.	WD repeat-containing protein 61-like.	0.939
F6RSF3_CIOIN	F6UMH0_CIOIN	ENSCINP00000001120	ENSCINP00000025950	SET domain-containing protein.	WW domain-containing protein.	0.489
F6RSF3_CIOIN	F6UMR8_CIOIN	ENSCINP00000001120	ENSCINP00000025949	SET domain-containing protein.	Uncharacterized protein.	0.489
F6RSF3_CIOIN	F6YDS2_CIOIN	ENSCINP00000001120	ENSCINP00000024599	SET domain-containing protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.535
F6UMH0_CIOIN	F6RSF3_CIOIN	ENSCINP00000025950	ENSCINP00000001120	WW domain-containing protein.	SET domain-containing protein.	0.489
F6UMH0_CIOIN	F6UMR8_CIOIN	ENSCINP00000025950	ENSCINP00000025949	WW domain-containing protein.	Uncharacterized protein.	0.900
F6UMH0_CIOIN	LOC100181112	ENSCINP00000025950	ENSCINP00000018469	WW domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.566
F6UMH0_CIOIN	Rbp1-like	ENSCINP00000025950	ENSCINP00000023772	WW domain-containing protein.	ARID domain-containing protein.	0.568
F6UMR8_CIOIN	F6RSF3_CIOIN	ENSCINP00000025949	ENSCINP00000001120	Uncharacterized protein.	SET domain-containing protein.	0.489
F6UMR8_CIOIN	F6UMH0_CIOIN	ENSCINP00000025949	ENSCINP00000025950	Uncharacterized protein.	WW domain-containing protein.	0.900
F6UMR8_CIOIN	LOC100181112	ENSCINP00000025949	ENSCINP00000018469	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.566
F6UMR8_CIOIN	Rbp1-like	ENSCINP00000025949	ENSCINP00000023772	Uncharacterized protein.	ARID domain-containing protein.	0.568
F6YDS2_CIOIN	F6RSF3_CIOIN	ENSCINP00000024599	ENSCINP00000001120	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	SET domain-containing protein.	0.535
F6ZIF8_CIOIN	LOC778705	ENSCINP00000015864	ENSCINP00000024728	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.997
H2XU12_CIOIN	F6PX81_CIOIN	ENSCINP00000033146	ENSCINP00000013055	Uncharacterized protein.	Plus3 domain-containing protein.	0.440
H2XU12_CIOIN	LOC100175816	ENSCINP00000033146	ENSCINP00000018251	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.754
H2XU12_CIOIN	LOC100182087	ENSCINP00000033146	ENSCINP00000031610	Uncharacterized protein.	WD repeat-containing protein 61-like.	0.784
LOC100175816	F6PX81_CIOIN	ENSCINP00000018251	ENSCINP00000013055	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.979