(8 nodes) Peptidyl-lysine monomethylation network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6SQS1_CIOIN	SET domain-containing protein. (192 aa)
	F6PI16_CIOIN	Uncharacterized protein. (234 aa)
	F6UMR8_CIOIN	Uncharacterized protein. (477 aa)
	F6UMH0_CIOIN	WW domain-containing protein. (284 aa)
	H2XN90_CIOIN	Uncharacterized protein. (224 aa)
	F6ZLL7_CIOIN	Protein-lysine N-methyltransferase; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (223 aa)
	F6PWM6_CIOIN	Protein-histidine N-methyltransferase. (488 aa)
	F6QD73_CIOIN	SET domain-containing protein. (411 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PI16_CIOIN	F6QD73_CIOIN	ENSCINP00000020275	ENSCINP00000020186	Uncharacterized protein.	SET domain-containing protein.	0.404
F6PWM6_CIOIN	F6QD73_CIOIN	ENSCINP00000009807	ENSCINP00000020186	Protein-histidine N-methyltransferase.	SET domain-containing protein.	0.477
F6QD73_CIOIN	F6PI16_CIOIN	ENSCINP00000020186	ENSCINP00000020275	SET domain-containing protein.	Uncharacterized protein.	0.404
F6QD73_CIOIN	F6PWM6_CIOIN	ENSCINP00000020186	ENSCINP00000009807	SET domain-containing protein.	Protein-histidine N-methyltransferase.	0.477
F6QD73_CIOIN	H2XN90_CIOIN	ENSCINP00000020186	ENSCINP00000031123	SET domain-containing protein.	Uncharacterized protein.	0.404
F6UMH0_CIOIN	F6UMR8_CIOIN	ENSCINP00000025950	ENSCINP00000025949	WW domain-containing protein.	Uncharacterized protein.	0.900
F6UMR8_CIOIN	F6UMH0_CIOIN	ENSCINP00000025949	ENSCINP00000025950	Uncharacterized protein.	WW domain-containing protein.	0.900
H2XN90_CIOIN	F6QD73_CIOIN	ENSCINP00000031123	ENSCINP00000020186	Uncharacterized protein.	SET domain-containing protein.	0.404