36 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	LOC100183130	CULLIN_2 domain-containing protein; Belongs to the cullin family. (744 aa)
	LOC100183530	F-box domain-containing protein. (449 aa)
	F6PW28_CIOIN	CULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
	LOC100184214	F-box/SPRY domain-containing protein 1. (262 aa)
	F7B8M0_CIOIN	F-box domain-containing protein. (791 aa)
	LOC100181614	Dynein assembly factor with WDR repeat domains 1-like. (415 aa)
	LOC100178394	F-box only protein 7. (515 aa)
	LOC100177208	S-phase kinase-associated protein 2. (453 aa)
	F6XS68_CIOIN	Uncharacterized protein. (395 aa)
	F6XRM1_CIOIN	Uncharacterized protein. (229 aa)
	F6R2H3_CIOIN	Uncharacterized protein. (168 aa)
	LOC100179689	F-box/LRR-repeat protein 12-like. (281 aa)
	betaTrCP	Beta-transducin repeat-containing HOMOLOGUE protein. (621 aa)
	F7A6H8_CIOIN	Uncharacterized protein. (250 aa)
	F6XHT6_CIOIN	UvrD-like helicase C-terminal domain-containing protein. (212 aa)
	F7AWL5_CIOIN	F-box domain-containing protein. (431 aa)
	F7ABN7_CIOIN	F-box domain-containing protein. (241 aa)
	F6PZ36_CIOIN	Uncharacterized protein. (229 aa)
	F6PRT8_CIOIN	F-box domain-containing protein. (202 aa)
	LOC100180425	F-box/LRR-repeat protein 20 isoform X1. (477 aa)
	F6TDN1_CIOIN	F-box domain-containing protein. (583 aa)
	LOC100178899	Uncharacterized protein. (259 aa)
	Meta3	Uncharacterized protein. (319 aa)
	LOC100183603	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (81 aa)
	H2XKE5_CIOIN	F-box domain-containing protein. (351 aa)
	H2XLJ7_CIOIN	Uncharacterized protein. (241 aa)
	LOC100181511	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
	LOC100182516	RING-box protein 1. (104 aa)
	H2XPX8_CIOIN	F-box domain-containing protein. (369 aa)
	H2XR16_CIOIN	F-box domain-containing protein. (274 aa)
	H2XR85_CIOIN	USP domain-containing protein; Belongs to the peptidase C19 family. (1053 aa)
	H2XRN7_CIOIN	Uncharacterized protein. (562 aa)
	LOC100179784	Uncharacterized protein LOC100179784. (378 aa)
	H2XYD4_CIOIN	Uncharacterized protein. (216 aa)
	H2XZK5_CIOIN	F-box domain-containing protein. (406 aa)
	H2Y1T2_CIOIN	WD_REPEATS_REGION domain-containing protein. (153 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PRT8_CIOIN	LOC100181511	ENSCINP00000025050	ENSCINP00000003403	F-box domain-containing protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.630
F6PW28_CIOIN	F6PZ36_CIOIN	ENSCINP00000013359	ENSCINP00000023849	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.812
F6PW28_CIOIN	F6R2H3_CIOIN	ENSCINP00000013359	ENSCINP00000018375	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.874
F6PW28_CIOIN	F6TDN1_CIOIN	ENSCINP00000013359	ENSCINP00000025638	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.701
F6PW28_CIOIN	F6XHT6_CIOIN	ENSCINP00000013359	ENSCINP00000019609	CULLIN_2 domain-containing protein; Belongs to the cullin family.	UvrD-like helicase C-terminal domain-containing protein.	0.587
F6PW28_CIOIN	F6XS68_CIOIN	ENSCINP00000013359	ENSCINP00000017127	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.809
F6PW28_CIOIN	F7A6H8_CIOIN	ENSCINP00000013359	ENSCINP00000018903	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.686
F6PW28_CIOIN	F7ABN7_CIOIN	ENSCINP00000013359	ENSCINP00000023075	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.776
F6PW28_CIOIN	F7AWL5_CIOIN	ENSCINP00000013359	ENSCINP00000023021	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.587
F6PW28_CIOIN	F7B8M0_CIOIN	ENSCINP00000013359	ENSCINP00000015235	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.654
F6PW28_CIOIN	H2XKE5_CIOIN	ENSCINP00000013359	ENSCINP00000030127	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.568
F6PW28_CIOIN	H2XPX8_CIOIN	ENSCINP00000013359	ENSCINP00000031712	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.568
F6PW28_CIOIN	H2XR16_CIOIN	ENSCINP00000013359	ENSCINP00000032100	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.874
F6PW28_CIOIN	H2XRN7_CIOIN	ENSCINP00000013359	ENSCINP00000032321	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.799
F6PW28_CIOIN	H2XZK5_CIOIN	ENSCINP00000013359	ENSCINP00000035089	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.648
F6PW28_CIOIN	H2Y1T2_CIOIN	ENSCINP00000013359	ENSCINP00000035866	CULLIN_2 domain-containing protein; Belongs to the cullin family.	WD_REPEATS_REGION domain-containing protein.	0.692
F6PW28_CIOIN	LOC100177208	ENSCINP00000013359	ENSCINP00000016594	CULLIN_2 domain-containing protein; Belongs to the cullin family.	S-phase kinase-associated protein 2.	0.998
F6PW28_CIOIN	LOC100178394	ENSCINP00000013359	ENSCINP00000016508	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box only protein 7.	0.895
F6PW28_CIOIN	LOC100178899	ENSCINP00000013359	ENSCINP00000027601	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.757
F6PW28_CIOIN	LOC100179689	ENSCINP00000013359	ENSCINP00000018765	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box/LRR-repeat protein 12-like.	0.737