STRINGSTRING
LOC100183816 LOC100183816 LOC100181450 LOC100181450 LOC100182767 LOC100182767 LOC100178236 LOC100178236 H2Y1U3_CIOIN H2Y1U3_CIOIN F6X1D6_CIOIN F6X1D6_CIOIN F6PQS1_CIOIN F6PQS1_CIOIN LOC100182343 LOC100182343 F6X3A4_CIOIN F6X3A4_CIOIN F6X3C5_CIOIN F6X3C5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100183816Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (306 aa)
LOC100181450Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (554 aa)
LOC100182767Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (700 aa)
LOC100178236Eukaryotic translation initiation factor 2D-like. (612 aa)
H2Y1U3_CIOINProtein kinase domain-containing protein. (1156 aa)
F6X1D6_CIOINRWD domain-containing protein. (156 aa)
F6PQS1_CIOINProtein kinase domain-containing protein. (190 aa)
LOC100182343Transcription initiation factor IIB-like. (314 aa)
F6X3A4_CIOINUncharacterized protein. (594 aa)
F6X3C5_CIOINHA2 domain-containing protein. (413 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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