(15 nodes) Alditol metabolic process network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100177329	Galactokinase-like. (396 aa)
	LOC100178794	Uncharacterized protein. (196 aa)
	H2Y1A2_CIOIN	Uncharacterized protein. (176 aa)
	LOC100185375	Uncharacterized protein. (448 aa)
	H2XLN7_CIOIN	Uncharacterized protein. (581 aa)
	LOC100180451	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. (300 aa)
	LOC100177066	Uncharacterized protein. (641 aa)
	LOC100184593	Sorbitol dehydrogenase. (360 aa)
	LOC100183886	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (683 aa)
	F6SG33_CIOIN	Uncharacterized protein; Belongs to the FGGY kinase family. (567 aa)
	LOC100181990	D-arabinitol dehydrogenase 1. (352 aa)
	LOC100180278	Uncharacterized protein LOC100180278. (358 aa)
	LOC100184965	Aspartate aminotransferase. (415 aa)
	LOC100183090	Triosephosphate isomerase. (247 aa)
	F6PYJ8_CIOIN	Uncharacterized protein; Belongs to the FGGY kinase family. (512 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PYJ8_CIOIN	LOC100183886	ENSCINP00000013033	ENSCINP00000002723	Uncharacterized protein; Belongs to the FGGY kinase family.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.876
F6SG33_CIOIN	H2XLN7_CIOIN	ENSCINP00000012436	ENSCINP00000030569	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein.	0.548
F6SG33_CIOIN	LOC100183090	ENSCINP00000012436	ENSCINP00000013486	Uncharacterized protein; Belongs to the FGGY kinase family.	Triosephosphate isomerase.	0.501
F6SG33_CIOIN	LOC100183886	ENSCINP00000012436	ENSCINP00000002723	Uncharacterized protein; Belongs to the FGGY kinase family.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.955
H2XLN7_CIOIN	F6SG33_CIOIN	ENSCINP00000030569	ENSCINP00000012436	Uncharacterized protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.548
H2XLN7_CIOIN	LOC100180278	ENSCINP00000030569	ENSCINP00000019198	Uncharacterized protein.	Uncharacterized protein LOC100180278.	0.572
H2XLN7_CIOIN	LOC100181990	ENSCINP00000030569	ENSCINP00000030526	Uncharacterized protein.	D-arabinitol dehydrogenase 1.	0.578
H2XLN7_CIOIN	LOC100183090	ENSCINP00000030569	ENSCINP00000013486	Uncharacterized protein.	Triosephosphate isomerase.	0.991
H2XLN7_CIOIN	LOC100183886	ENSCINP00000030569	ENSCINP00000002723	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.982
H2XLN7_CIOIN	LOC100184593	ENSCINP00000030569	ENSCINP00000004620	Uncharacterized protein.	Sorbitol dehydrogenase.	0.601
H2Y1A2_CIOIN	LOC100178794	ENSCINP00000035686	ENSCINP00000005513	Uncharacterized protein.	Uncharacterized protein.	0.656
H2Y1A2_CIOIN	LOC100180278	ENSCINP00000035686	ENSCINP00000019198	Uncharacterized protein.	Uncharacterized protein LOC100180278.	0.529
H2Y1A2_CIOIN	LOC100180451	ENSCINP00000035686	ENSCINP00000005307	Uncharacterized protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.691
H2Y1A2_CIOIN	LOC100181990	ENSCINP00000035686	ENSCINP00000030526	Uncharacterized protein.	D-arabinitol dehydrogenase 1.	0.529
H2Y1A2_CIOIN	LOC100183090	ENSCINP00000035686	ENSCINP00000013486	Uncharacterized protein.	Triosephosphate isomerase.	0.461
H2Y1A2_CIOIN	LOC100184593	ENSCINP00000035686	ENSCINP00000004620	Uncharacterized protein.	Sorbitol dehydrogenase.	0.529
LOC100177066	LOC100183090	ENSCINP00000012511	ENSCINP00000013486	Uncharacterized protein.	Triosephosphate isomerase.	0.623
LOC100177066	LOC100184965	ENSCINP00000012511	ENSCINP00000017065	Uncharacterized protein.	Aspartate aminotransferase.	0.835
LOC100177329	LOC100183090	ENSCINP00000010220	ENSCINP00000013486	Galactokinase-like.	Triosephosphate isomerase.	0.498
LOC100178794	H2Y1A2_CIOIN	ENSCINP00000005513	ENSCINP00000035686	Uncharacterized protein.	Uncharacterized protein.	0.656