(20 nodes) Kinesin binding network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6VW31_CIOIN	Uncharacterized protein. (333 aa)
	F7AZQ8_CIOIN	Uncharacterized protein. (720 aa)
	F6WBB7_CIOIN	RUN domain-containing protein. (340 aa)
	LOC100181294	Uncharacterized protein. (830 aa)
	F7AHV0_CIOIN	Uncharacterized protein. (189 aa)
	F6VYL7_CIOIN	Uncharacterized protein. (361 aa)
	F6ZM72_CIOIN	Uncharacterized protein. (197 aa)
	F6TBG7_CIOIN	Uncharacterized protein. (1221 aa)
	F6PZR6_CIOIN	Uncharacterized protein. (728 aa)
	LOC100177517	Craniofacial development protein 1; May play a role during embryogenesis. (241 aa)
	H2XLI1_CIOIN	Uncharacterized protein. (334 aa)
	LOC100186675	AP-1 complex-associated regulatory protein isoform X1. (287 aa)
	H2XQ82_CIOIN	Uncharacterized protein. (217 aa)
	H2XQW5_CIOIN	Uncharacterized protein. (186 aa)
	H2XSM3_CIOIN	Uncharacterized protein. (291 aa)
	H2XTN1_CIOIN	Uncharacterized protein. (141 aa)
	H2XUT8_CIOIN	PH domain-containing protein. (249 aa)
	LOC100180686	C-Jun-amino-terminal kinase-interacting protein 1 isoform X2. (432 aa)
	H2XXU0_CIOIN	TPR_REGION domain-containing protein. (597 aa)
	H2Y074_CIOIN	Uncharacterized protein. (275 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PZR6_CIOIN	H2XXU0_CIOIN	ENSCINP00000023837	ENSCINP00000034474	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.681
F6PZR6_CIOIN	LOC100181294	ENSCINP00000023837	ENSCINP00000005526	Uncharacterized protein.	Uncharacterized protein.	0.772
F6TBG7_CIOIN	H2XXU0_CIOIN	ENSCINP00000022032	ENSCINP00000034474	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.859
F6TBG7_CIOIN	LOC100180686	ENSCINP00000022032	ENSCINP00000033710	Uncharacterized protein.	C-Jun-amino-terminal kinase-interacting protein 1 isoform X2.	0.630
F7AZQ8_CIOIN	H2XXU0_CIOIN	ENSCINP00000002052	ENSCINP00000034474	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.754
H2XQ82_CIOIN	H2XQW5_CIOIN	ENSCINP00000031816	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQ82_CIOIN	H2XTN1_CIOIN	ENSCINP00000031816	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XQ82_CIOIN	H2Y074_CIOIN	ENSCINP00000031816	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.942
H2XQW5_CIOIN	H2XQ82_CIOIN	ENSCINP00000032049	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.936
H2XQW5_CIOIN	H2XTN1_CIOIN	ENSCINP00000032049	ENSCINP00000033015	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XQW5_CIOIN	H2Y074_CIOIN	ENSCINP00000032049	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.947
H2XTN1_CIOIN	H2XQ82_CIOIN	ENSCINP00000033015	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.945
H2XTN1_CIOIN	H2XQW5_CIOIN	ENSCINP00000033015	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.916
H2XTN1_CIOIN	H2Y074_CIOIN	ENSCINP00000033015	ENSCINP00000035308	Uncharacterized protein.	Uncharacterized protein.	0.925
H2XXU0_CIOIN	F6PZR6_CIOIN	ENSCINP00000034474	ENSCINP00000023837	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.681
H2XXU0_CIOIN	F6TBG7_CIOIN	ENSCINP00000034474	ENSCINP00000022032	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.859
H2XXU0_CIOIN	F7AZQ8_CIOIN	ENSCINP00000034474	ENSCINP00000002052	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.754
H2XXU0_CIOIN	LOC100180686	ENSCINP00000034474	ENSCINP00000033710	TPR_REGION domain-containing protein.	C-Jun-amino-terminal kinase-interacting protein 1 isoform X2.	0.795
H2Y074_CIOIN	H2XQ82_CIOIN	ENSCINP00000035308	ENSCINP00000031816	Uncharacterized protein.	Uncharacterized protein.	0.942
H2Y074_CIOIN	H2XQW5_CIOIN	ENSCINP00000035308	ENSCINP00000032049	Uncharacterized protein.	Uncharacterized protein.	0.947