STRINGSTRING
H2Y213_CIOIN H2Y213_CIOIN LOC100184368 LOC100184368 LOC104265927 LOC104265927 smad4 smad4 F6XKR6_CIOIN F6XKR6_CIOIN F7A9C9_CIOIN F7A9C9_CIOIN LOC100178899 LOC100178899 H2XQV1_CIOIN H2XQV1_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2Y213_CIOINUncharacterized protein. (124 aa)
LOC100184368Integrin-linked protein kinase. (447 aa)
LOC104265927Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (384 aa)
smad4Mothers against decapentaplegic homolog. (527 aa)
F6XKR6_CIOINUncharacterized protein. (180 aa)
F7A9C9_CIOINUncharacterized protein. (337 aa)
LOC100178899Uncharacterized protein. (259 aa)
H2XQV1_CIOINUncharacterized protein. (181 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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