(15 nodes) cAMP binding network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6VQE7_CIOIN	Uncharacterized protein. (223 aa)
	LOC100186896	Uncharacterized protein. (791 aa)
	LOC100179599	Uncharacterized protein. (381 aa)
	F7AQT2_CIOIN	Uncharacterized protein. (312 aa)
	F6YWA2_CIOIN	Cyclic nucleotide-binding domain-containing protein. (502 aa)
	LOC100179564	cAMP-dependent protein kinase type II regulatory subunit-like isoform X1. (394 aa)
	F6X4F9_CIOIN	Uncharacterized protein. (262 aa)
	F6WZV6_CIOIN	Cyclic nucleotide-binding domain-containing protein. (499 aa)
	LOC100180193	Uncharacterized protein LOC100180193 isoform X2. (585 aa)
	F6ZS78_CIOIN	Uncharacterized protein. (245 aa)
	H2XMX5_CIOIN	Cyclic nucleotide-binding domain-containing protein. (366 aa)
	H2XN97_CIOIN	Uncharacterized protein. (200 aa)
	H2XPA3_CIOIN	Ras-GEF domain-containing protein. (451 aa)
	H2XPT7_CIOIN	Uncharacterized protein. (105 aa)
	H2XTZ7_CIOIN	Cyclic nucleotide-binding domain-containing protein. (193 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6WZV6_CIOIN	F6YWA2_CIOIN	ENSCINP00000017729	ENSCINP00000012821	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.556
F6X4F9_CIOIN	H2XN97_CIOIN	ENSCINP00000015954	ENSCINP00000031130	Uncharacterized protein.	Uncharacterized protein.	0.413
F6X4F9_CIOIN	H2XPA3_CIOIN	ENSCINP00000015954	ENSCINP00000031486	Uncharacterized protein.	Ras-GEF domain-containing protein.	0.900
F6YWA2_CIOIN	F6WZV6_CIOIN	ENSCINP00000012821	ENSCINP00000017729	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.556
H2XN97_CIOIN	F6X4F9_CIOIN	ENSCINP00000031130	ENSCINP00000015954	Uncharacterized protein.	Uncharacterized protein.	0.413
H2XPA3_CIOIN	F6X4F9_CIOIN	ENSCINP00000031486	ENSCINP00000015954	Ras-GEF domain-containing protein.	Uncharacterized protein.	0.900
LOC100179564	LOC100179599	ENSCINP00000014963	ENSCINP00000005345	cAMP-dependent protein kinase type II regulatory subunit-like isoform X1.	Uncharacterized protein.	0.567
LOC100179599	LOC100179564	ENSCINP00000005345	ENSCINP00000014963	Uncharacterized protein.	cAMP-dependent protein kinase type II regulatory subunit-like isoform X1.	0.567